fadI:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[fadI:Gene|''fadI]]'' (synonyms: ''yfcY, ECK2336, b2342, JW2339'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''fadI''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[fadI:Gene_Product(s)|YfcY product]]<ref name='LIB:Riley_2006'/>: beta-ketoacyl-CoA thiolase, anaerobic, subunit product, B2342 product, FadI product
''yfcY, ECK2336, b2342, JW2339''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW2339''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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FadI monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
FadI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:subunit of fatty acid oxidation complex|subunit of fatty acid oxidation complex]]<ref name='LIB:EcoCyc11.1'/>,[[:Category:Complex:fatty acid oxidation complex|fatty acid oxidation complex]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:subunit of fatty acid oxidation complex|subunit of fatty acid oxidation complex]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:fatty acid oxidation complex|fatty acid oxidation complex]]<ref name='LIB:EcoCyc11.1'/>


Thiolase of anaerobic fatty acid oxidation complex FadIJ; 3-ketoacyl-CoA thiolase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''beta-ketoacyl-CoA thiolase, anaerobic, subunit<ref name='LIB:Riley_2006'/>, B2342<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FadI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2336, JW2339, yfcY, b2342''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:fadIJ|fadIJ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:fadIJ|fadIJ]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fadI&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7213]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003788&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fadI&loc=MG1655%3A2458491..2457181,W3110%3A2465915..2464605,REL606%3A2402823..2404133,BW2952%3A2342986..2344296]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2342986&end=2344296&gene=fadI&aa=mgqvlplvtrqgdriaivsglrtpfarqatafhgipavdlgkmvvgellarseipaevieqlvfgqvvqmpeapniareivlgtgmnvhtdaysvsracatsfqavanvaeslmagtiragiaggadsssvlpigvskklarvlvdvnkartmsqrlklfsrlrlrdlmpvppavaeystglrmgdtaeqmaktygitreqqdalahrshqraaqawsdgklkeevmtafippykqplvednnirgnssladyaklrpafdrkhgtvtaanstpltdgaaavilmtesrakelglvplgylrsyaftaidvwqdmllgpawstplaleragltmsdltlidmheafaaqtlaniqllgserfarealgrahatgevddskfnvlggsiayghpfaatgarmitqtlhelrrrgggfglvtacaagglgaamvleae]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fadI+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fadI]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Also known as beta-oxidation complex II. FadR regulon. FadIJ are in a high MW complex. FadAB and FadIJ are paralogs.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fadI

Gene Synonym(s)

yfcY, ECK2336, b2342, JW2339[1][2], JW2339

Product Desc.

FadI[2][3];

Component of subunit of fatty acid oxidation complex[3]; fatty acid oxidation complex[3]

Thiolase of anaerobic fatty acid oxidation complex FadIJ; 3-ketoacyl-CoA thiolase[4]

Product Synonyms(s)

beta-ketoacyl-CoA thiolase, anaerobic, subunit[1], B2342[2][1], FadI[2][1], YfcY[2][1] , ECK2336, JW2339, yfcY, b2342

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fadIJ[2]

Regulation/Activity
Quick Links



        

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Notes

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Also known as beta-oxidation complex II. FadR regulon. FadIJ are in a high MW complex. FadAB and FadIJ are paralogs.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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