pgpB:Quickview: Difference between revisions

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{|   id="Y49aeef83bf5f9"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[pgpB:Gene|''pgpB]]'' (synonyms: ''ECK1273, b1278, JW1270'')<ref name='LIB:Riley_2006'/>
''pgpB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[pgpB:Gene_Product(s)|PgpB product]]<ref name='LIB:Riley_2006'/>: phosphatidylglycerophosphatase B product, B1278 product
''ECK1273, b1278, JW1270''<ref name='LIB:Riley_2006'/>, JW1270''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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PGPPHOSPHAB-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Phosphatidylglycerophosphate phosphatase, membrane bound; also has a minor undecaprenyl pyrophosphate pyrophosphatase (UppP) activity<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''phosphatidylglycerophosphatase B<ref name='LIB:Riley_2006'/>, B1278<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PgpB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1273, JW1270, b1278''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:pgpB|pgpB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:pgpB|pgpB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pgpB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10705]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000697&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pgpB&loc=MG1655%3A1337354..1338118,W3110%3A1341044..1341808,DH10B%3A1426750..1427514,REL606%3A1337702..1338466,BW2952%3A1228203..1228967]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1228203&end=1228967&gene=pgpB&aa=mrsiarrtavgaalllvmpvavwisgwrwqpgeqswllkaafwvtetvtqpwgvithlilfgwflwclrfrikaafvlfailaaailvgqgvkswikdkvqeprpfviwlekthhipvdefytlkraergnlvkeqlaeeknipqylrshwqketgfafpsghtmfaaswallavgllwprrrtltiaillvwatgvmgsrlllgmhwprdlvvatliswalvavatwlaqricgpltppaeenreiaqreqes]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pgpB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pgpB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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The pgpA gene is nonessential, but is synthetically lethal with a bacA ybjG double mutant, due to its UppP activity. ybjG, pgpB, and lpxT are paralogs. Overexpression confers bacitracin resistance.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pgpB

Gene Synonym(s)

ECK1273, b1278, JW1270[1], JW1270

Product Desc.

Phosphatidylglycerophosphate phosphatase, membrane bound; also has a minor undecaprenyl pyrophosphate pyrophosphatase (UppP) activity[2]

Product Synonyms(s)

phosphatidylglycerophosphatase B[1], B1278[3][1], PgpB[3][1] , ECK1273, JW1270, b1278

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pgpB[3]

Regulation/Activity
Quick Links



        

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Notes

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The pgpA gene is nonessential, but is synthetically lethal with a bacA ybjG double mutant, due to its UppP activity. ybjG, pgpB, and lpxT are paralogs. Overexpression confers bacitracin resistance.[2]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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