fur:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(14 intermediate revisions by 2 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.3105.T46a99ca0f08b0-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3105.B49aee6b723020-->
<!--
<!--
******************************************************************************************
******************************************************************************************
*
*  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|{{Prettytable}}
{|   id="B49aee6b723020"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[fur:Gene|''fur]]'' (synonyms: ''ECK0671, b0683, JW0669'')<ref name='LIB:Riley_2006'/>
''fur''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[fur:Gene_Product(s)|Fur product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport product, B0683 product, negative regulator, regulates production of siderophores and transport systens for siderophores product
''ECK0671, b0683, JW0669''<ref name='LIB:Riley_2006'/>, JW0669''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Fur transcriptional dual regulator|Fur transcriptional dual regulator]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:Fur transcriptional dual regulator|Fur transcriptional dual regulator]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Ferric iron uptake global transcriptional repressor; activated by Fe+2; zinc metalloprotein<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport<ref name='LIB:Riley_2006'/>, B0683<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fur<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, negative regulator, regulates production of siderophores and transport systens for siderophores<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0671, JW0669, b0683''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:Txn_unit:fur|fur]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fldA-fur|fldA-fur]]<ref name='LIB:EcoCyc10.6'/>, OP00163  
transcription unit(s): [[:Category:Txn_unit:fur|fur]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fldA-fur|fldA-fur]]<ref name='LIB:EcoCyc10.6'/>, OP00163  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.3105.T46a99ca0f08b0&page=3105&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fur&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10359]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000352&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fur&loc=MG1655%3A709869..709423,W3110%3A711068..710622,DH10B%3A762461..762015,REL606%3A692741..692295,BW2952%3A612183..612629]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=612183&end=612629&gene=fur&aa=mtdnntalkkaglkvtlprlkilevlqepdnhhvsaedlykrlidmgeeiglatvyrvlnqfddagivtrhnfeggksvfeltqqhhhdhlicldcgkviefsddsiearqreiaakhgirltnhslylyghcaegdcredehahegk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fur+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fur]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.3105.B49aee6b723020&page=3105&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.3105.T46a99ca0f08b0-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.3105.B49aee6b723020--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Fur translation in coupled to the translation of the upstream leader pepidie Uof; Uof translation is inhibited by the antisense sRNA ryhB; Uof translation opens up a hairpin that blocks Fur translation (Vecerek, 2007).  Amino acid composition analysis indicates that the first Met is mssing from the mature Fur protein (Wee, 1988). Binds TrxA (Kumar, 2004).<ref name='LIB:EcoGene'/>




Line 65: Line 83:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:50, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fur

Gene Synonym(s)

ECK0671, b0683, JW0669[1], JW0669

Product Desc.

Fur[2][3];

Component of Fur transcriptional dual regulator[2][3]

Ferric iron uptake global transcriptional repressor; activated by Fe+2; zinc metalloprotein[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport[1], B0683[2][1], Fur[2][1], negative regulator, regulates production of siderophores and transport systens for siderophores[2][1] , ECK0671, JW0669, b0683

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fur[2], fldA-fur[2], OP00163

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Fur translation in coupled to the translation of the upstream leader pepidie Uof; Uof translation is inhibited by the antisense sRNA ryhB; Uof translation opens up a hairpin that blocks Fur translation (Vecerek, 2007). Amino acid composition analysis indicates that the first Met is mssing from the mature Fur protein (Wee, 1988). Binds TrxA (Kumar, 2004).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=fur:Quickview&oldid=1397060"