ubiB:Quickview: Difference between revisions

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{|   id="A49b027986a01b"  class=" tableEdit New_Quickview_Table" 
 
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!align=left {{table_heading_style}} |Standard Name
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''ubiB''
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!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS''<ref name='LIB:Riley_2006'/>
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Product Desc.
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[[ubiB:Gene|''ubiB]]'' (synonyms: ''ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS'')<ref name='LIB:Riley_2006'/>
2-OCTAPRENYLPHENOL-
Required for octaprenylphenol hydroxylation, the first step of ubiquinone synthesis; regulator of 2'-N-acetyltransferase; member of the ABC1 family of putative protein kinases<ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Product Synonyms(s)
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[[ubiB:Gene_Product(s)|UbiB product]]<ref name='LIB:Riley_2006'/>: 2-octaprenylphenol hydroxylase product, B3835 product, YigQ product, YigS product, AarF product, YigR product
''2-octaprenylphenol hydroxylase<ref name='LIB:Riley_2006'/>, B3835<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AarF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , aarF, ECK3829, JW3812, yigQ, yigR, yigS, b3835''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Function from GO
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2-OCTAPRENYLPHENOL-HYDROX-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
<GO_nr />
 
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/>  
|-
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ubiB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11476]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001437&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ubiB&loc=MG1655%3A4018249..4019889,W3110%3A3616455..3614815,REL606%3A3998697..4000337,DH10B%3A4117169..4118809,BW2952%3A3907918..3909558]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3907918&end=3909558&gene=ubiB&aa=mtpgevrrlyfiirtflsygldelipkmritlplrlwryslfwmpnrhkdkllgerlrlalqelgpvwikfgqmlstrrdlfpphiadqlallqdkvapfdgklakqqieaamgglpveawfddfeikplasasiaqvhtarlksngkevvikvirpdilpvikadlkliyrlarwvprllpdgrrlrptevvreyektlidelnllresanaiqlrrnfedspmlyipevypdycsegmmvmeriygipvsdvaalekngtnmkllaergvqvfftqvfrdsffhadmhpgnifvsyehpenpkyigidcgivgslnkedkrylaenfiaffnrdyrkvaelhvdsgwvppdtnveefefairtvcepifekplaeisfghvllnlfntarrfnmevqpqlvllqktllyvegvgrqlypqldlwktakpfleswikdqvgipalvrafkekapfwvekmpelpelvydslrqgkylqhsvdkiarelqsnhvrqgqsryflgigatlvlsgtfllvsrpewglmpgwlmaggliawfvgwrktr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ubiB]]&nbsp;&nbsp;
 
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
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fre was previously mis-identified as ubiB<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ubiB

Gene Synonym(s)

ECK3829, b3835, JW3812, aarF, yigQ, yigS, yigR, yigQ12, yigQRS[1]

Product Desc.

2-OCTAPRENYLPHENOL- Required for octaprenylphenol hydroxylation, the first step of ubiquinone synthesis; regulator of 2'-N-acetyltransferase; member of the ABC1 family of putative protein kinases[2]

Product Synonyms(s)

2-octaprenylphenol hydroxylase[1], B3835[3][1], YigQ[3][1], YigS[3][1], AarF[3][1], YigR[3][1], UbiB[3][1] , aarF, ECK3829, JW3812, yigQ, yigR, yigS, b3835

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ubiE-yigP-ubiB[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


fre was previously mis-identified as ubiB[2]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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