yhbU:Quickview: Difference between revisions

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{|   id="C49b03170e693c"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yhbU:Gene|''yhbU]]'' (synonyms: ''ECK3146, b3158, JW3127'')<ref name='LIB:Riley_2006'/>
''yhbU''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yhbU:Gene_Product(s)|YhbU product]]<ref name='LIB:Riley_2006'/>: predicted peptidase (collagenase-like) product, B3158 product
''ECK3146, b3158, JW3127''<ref name='LIB:Riley_2006'/>, JW3127''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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predicted peptidase (collagenase-like)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
predicted peptidase (collagenase-like)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Function unknown, U32 peptidase family<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted peptidase (collagenase-like)<ref name='LIB:Riley_2006'/>, B3158<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3146, JW3127, b3158''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yhbU|yhbU]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yhbU|yhbU]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yhbU&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7652]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004202&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yhbU&loc=MG1655%3A3299507..3300502,W3110%3A3301340..3302335,REL606%3A3236719..3237714,DH10B%3A3397252..3398247,BW2952%3A3186655..3187650]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3186655&end=3187650&gene=yhbU&aa=mellcpagnlpalkaaiengadavyiglkddtnarhfaglnftekklqeavsfvhqhrrklhiaintfahpdgyarwqravdmaaqlgadaliladlamleyaaeryphierhvsvqasatneeainfyhrhfdvarvvlprvlsihqvkqlarvtpvplevfafgslcimsegrcylssyltgespntigacsparfvrwqqtpqglesrlnevlidryqdgenagyptlckgrylvdgeryhaleeptslntlellpelmaaniasvkiegrqrspayvsqvakvwrqaidrckadpqnfvpqsawmetlgsmsegtqttlgayhrkwq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhbU+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yhbU]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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AFMB Structural Genomics target No. 32 (http://afmb.cnrs-mrs.fr/article171.html). ydcP, yegQ, yhbU, and yhbV are paralogs.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yhbU

Gene Synonym(s)

ECK3146, b3158, JW3127[1], JW3127

Product Desc.

predicted peptidase (collagenase-like)[2][3]

Function unknown, U32 peptidase family[4]

Product Synonyms(s)

predicted peptidase (collagenase-like)[1], B3158[2][1], YhbU[2][1] , ECK3146, JW3127, b3158

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yhbU[2]

Regulation/Activity
Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


AFMB Structural Genomics target No. 32 (http://afmb.cnrs-mrs.fr/article171.html). ydcP, yegQ, yhbU, and yhbV are paralogs.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.