aer:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[aer:Gene|''aer]]'' (synonyms: ''ECK3062, b3072, JW3043, air, yqjJ'')<ref name='LIB:Riley_2006'/>
''aer''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[aer:Gene_Product(s)|Aer product]]<ref name='LIB:Riley_2006'/>: fused signal transducer for aerotaxis sensory component product, methyl accepting chemotaxis component product, B3072 product, YqjJ product, Air product
''ECK3062, b3072, JW3043, air, yqjJ''<ref name='LIB:Riley_2006'/>, yqjJ''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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aerotaxis sensor receptor, flavoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
aerotaxis sensor receptor, flavoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Aerotaxis and redox taxis sensor; flavoprotein; senses intracellular energy (redox) levels, and mediates energy taxis, as does Tsr<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''fused signal transducer for aerotaxis sensory component<ref name='LIB:Riley_2006'/>, methyl accepting chemotaxis component<ref name='LIB:Riley_2006'/>, B3072<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YqjJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Air<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Aer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , air, ECK3062, JW3043, yqjJ, b3072''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:aer|aer]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:aer|aer]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=aer&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7595]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004149&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=aer&loc=MG1655%3A3217098..3215578,W3110%3A3217732..3216212,DH10B%3A3314843..3313323,REL606%3A3151893..3150373,BW2952%3A3102726..3104246]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3102726&end=3104246&gene=aer&aa=msshpyvtqqntpladdttlmsttdlqsyithandtfvqvsgytlqelqgqphnmvrhpdmpkaafadmwftlkkgepwsgivknrrkngdhywvranavpmvregkisgymsirtratdeeiaaveplykalnagrtskrihkglvvrkgwlgklpslplrwrargvmtlmfillaamlwfvaapvvtyilcalvvllasacfewqivrpienvahqalkvatgernsvehlnrsdelgltlravgqlglmcrwlindvssqvssvrngsetlakgtdelnehtqqtvdnvqqtvatmnqmaasvkqnsatasaadklsitasnaavqggeamttviktmddiadstqrigtitslindiafqtnilalnaaveaarageqgkgfavvagevrhlasrsanaandirklidasadkvqsgsqqvhaagrtmedivaqvknvtqliaqishstleqadglssltravdelnlitqknaelveesaqvsamvkhrasrledavtvlh]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aer+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=aer]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Energy taxis includes aerotaxis, redox taxis and glycerol taxis. aer is up-regulated by FlhCD and CRP. aer mutants are down for genes involved in anaerobic respiration and the Entner-Doudoroff pathway. The six operons up-regulated by Aer are dmsABC, fdnGHI, frdABCD, glpAB, nrfABCDE and edd.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

aer

Gene Synonym(s)

ECK3062, b3072, JW3043, air, yqjJ[1], yqjJ

Product Desc.

aerotaxis sensor receptor, flavoprotein[2][3]

Aerotaxis and redox taxis sensor; flavoprotein; senses intracellular energy (redox) levels, and mediates energy taxis, as does Tsr[4]

Product Synonyms(s)

fused signal transducer for aerotaxis sensory component[1], methyl accepting chemotaxis component[1], B3072[2][1], YqjJ[2][1], Air[2][1], Aer[2][1] , air, ECK3062, JW3043, yqjJ, b3072

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): aer[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Energy taxis includes aerotaxis, redox taxis and glycerol taxis. aer is up-regulated by FlhCD and CRP. aer mutants are down for genes involved in anaerobic respiration and the Entner-Doudoroff pathway. The six operons up-regulated by Aer are dmsABC, fdnGHI, frdABCD, glpAB, nrfABCDE and edd.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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