astC:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[astC:Gene|''astC]]'' (synonyms: ''ECK1746, b1748, JW1737, argM, cstC, ydjW'')<ref name='LIB:Riley_2006'/>
''astC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[astC:Gene_Product(s)|AstC product]]<ref name='LIB:Riley_2006'/>: succinylornithine transaminase, PLP-dependent product, B1748 product, YdjW product, CstC product, ArgM product
''ECK1746, b1748, JW1737, argM, cstC, ydjW''<ref name='LIB:Riley_2006'/>, ydjW''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:SUCCORNTRANSAM-CPLX|SUCCORNTRANSAM-CPLX]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:SUCCORNTRANSAM-CPLX|SUCCORNTRANSAM-CPLX]]<ref name='LIB:EcoCyc10.6'/>


Succinylornithine transaminase, mutant cannot catabolize arginine, overproduction complements argD mutants; carbon starvation protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''succinylornithine transaminase, PLP-dependent<ref name='LIB:Riley_2006'/>, B1748<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdjW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AstC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , argM, cstC, ECK1746, JW1737, ydjW, b1748''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:astCADBE|astCADBE]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:astCADBE|astCADBE]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=astC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6944]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003532&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=astC&loc=MG1655%3A1830006..1828786,W3110%3A1833696..1832476,DH10B%3A1920577..1919357,REL606%3A1809247..1808027,BW2952%3A1720845..1722065]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1720845&end=1722065&gene=astC&aa=msqpitrenfdewmipvyapapfipvrgegsrlwdqqgkeyidfaggiavnalghahpelrealneqaskfwhtgngytnepvlrlakklidatfadrvffcnsgaeaneaalklarkfahdrygshksgivafknafhgrtlftvsaggqpaysqdfaplpadirhaayndinsasaliddstcavivepiqgeggvvpasnaflqglrelcnrhnallifdevqtgvgrtgelyaymhygvtpdllttakalgggfpvgallateecarvmtvgthgttyggnplasavagkvlelintpemlngvkqrhdwfverlntinhryglfsevrglglligcvlnadyagqakqisqeaakagvmvliaggnvvrfapalnvseeevttgldrfaaacehfvsrgss]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=astC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=astC]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

astC

Gene Synonym(s)

ECK1746, b1748, JW1737, argM, cstC, ydjW[1], ydjW

Product Desc.

AstC[2][3];

Component of SUCCORNTRANSAM-CPLX[2]

Succinylornithine transaminase, mutant cannot catabolize arginine, overproduction complements argD mutants; carbon starvation protein[4]

Product Synonyms(s)

succinylornithine transaminase, PLP-dependent[1], B1748[2][1], YdjW[2][1], CstC[2][1], ArgM[2][1], AstC[2][1] , argM, cstC, ECK1746, JW1737, ydjW, b1748

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): astCADBE[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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