ybiV:Quickview: Difference between revisions

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{|   id="R49b02ae9d16d6"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ybiV:Gene|''ybiV]]'' (synonyms: ''ECK0812, b0822, JW0806, supH'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ybiV''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ybiV:Gene_Product(s)|YbiV product]]<ref name='LIB:Riley_2006'/>: predicted hydrolase product, B0822 product, SupH product
''ECK0812, b0822, JW0806, supH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, supH''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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sugar phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
sugar phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P; phosphoramidase and acetyl phosphatase; HAD12<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted hydrolase<ref name='LIB:Riley_2006'/>, YbiV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0822<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SupH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0812, JW0806, supH, b0822''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybiV|ybiV]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybiV|ybiV]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybiV&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6425]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003025&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybiV&loc=MG1655%3A859251..858436,W3110%3A860450..859635,DH10B%3A913179..912364,REL606%3A852580..851765,BW2952%3A761404..762219]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=761404&end=762219&gene=ybiV&aa=msvkvivtdmdgtflndaktynqprfmaqyqelkkrgikfvvasgnqyyqlisffpelkdeisfvaengalvyehgkqlfhgeltrhesrivigellkdkqlnfvacglqsayvsenapeafvalmakhyhrlkpvkdyqeiddvlfkfslnlpdeqiplvidklhvaldgimkpvtsgfgfidliipglhkangisrllkrwdlspqnvvaigdsgndaemlkmarysfamgnaaenikqiaryatddnnhegalnviqavldntspfns]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybiV+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybiV]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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HAD superfamily. The natural substrate(s) and physiological role of YbiV is unknown. In vitro activities demonstrated by Kuznetsova et al. (2005, 2006).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:44, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ybiV

Gene Synonym(s)

ECK0812, b0822, JW0806, supH[1][2], supH

Product Desc.

sugar phosphatase[2][3]

Sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P; phosphoramidase and acetyl phosphatase; HAD12[4]

Product Synonyms(s)

predicted hydrolase[1], YbiV[2][1], B0822[2][1], SupH[2][1] , ECK0812, JW0806, supH, b0822

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybiV[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


HAD superfamily. The natural substrate(s) and physiological role of YbiV is unknown. In vitro activities demonstrated by Kuznetsova et al. (2005, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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