Paralogs: Difference between revisions

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!|Gene!!Paralog gene!!Score!!Expect!!Method!!Identities!!Positives!!Gaps
!|Gene!!Paralog!!Score!!E value!!Method!!Identities!!Positives!!Gaps
|-  
|-  
|
|
ubiF
[[ubiF:Quickview|''ubiF'']]
|
|
ubiI
[[visC:Quickview|''ubiI'']]
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|
208 bits (530)
208 bits (530)
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2e-63
2e-63
|
|
BLAST (EcoCyc)
BLAST (Compositional
 
matrix adjust.)
|
|
138/368 (38%)
138/368 (38%)
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|-  
|-  
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ubiF
[[ubiF:Quickview|''ubiF'']]
|
|
ubiH
[[ubiH:Quickview|''ubiH'']]
|
|
148 bits (373)
148 bits (373)
Line 39: Line 41:
6e-41
6e-41
|
|
BLAST (EcoCyc)
BLAST (Compositional
 
matrix adjust.)
|
|
95/284 (33%)
95/284 (33%)
Line 48: Line 52:
|-  
|-  
|
|
ubiF
[[ubiF:Quickview|''ubiF'']]
|
|
mhpA
[[mhpA:Quickview|''mhpA'']]
|
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35.0 bits (79)
35.0 bits (79)
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0.008
0.008
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BLAST (EcoCyc)
BLAST (Compositional
 
matrix adjust.)
|
|
46/204 (23%)
46/204 (23%)
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!|Gene!!Paralog!!Score!!Expect value!!Method!!Amino acid identities!!Amino acid similarities!!Gaps
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Latest revision as of 18:38, 28 April 2017

Manually curated list of paralogous proteins in the E. coli K-12 genome. IN PROGRESS


Gene Paralog Score E value Method Identities Positives Gaps

ubiF

ubiI

208 bits (530)

2e-63

BLAST (Compositional

matrix adjust.)

138/368 (38%)

201/368 (55%)

5/368 (1%)

ubiF

ubiH

148 bits (373)

6e-41

BLAST (Compositional

matrix adjust.)

95/284 (33%)

138/284 (49%)

1/284 (0%)

ubiF

mhpA

35.0 bits (79)

0.008

BLAST (Compositional

matrix adjust.)

46/204 (23%)

78/204 (38%)

26/204 (13%)

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