Paralogs: Difference between revisions
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Manually curated list of paralogous proteins in the E. coli K-12 genome. IN PROGRESS | |||
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!|Gene!!Paralog | !|Gene!!Paralog!!Score!!E value!!Method!!Identities!!Positives!!Gaps | ||
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[[ubiF:Quickview|''ubiF'']] | |||
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[[visC:Quickview|''ubiI'']] | |||
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208 bits (530) | |||
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2e-63 | |||
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BLAST (Compositional | |||
matrix adjust.) | |||
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138/368 (38%) | |||
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201/368 (55%) | |||
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5/368 (1%) | |||
|- | |||
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[[ubiF:Quickview|''ubiF'']] | |||
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[[ubiH:Quickview|''ubiH'']] | |||
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148 bits (373) | |||
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6e-41 | |||
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BLAST (Compositional | |||
matrix adjust.) | |||
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95/284 (33%) | |||
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138/284 (49%) | |||
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1/284 (0%) | |||
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[[ubiF:Quickview|''ubiF'']] | |||
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[[mhpA:Quickview|''mhpA'']] | |||
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35.0 bits (79) | |||
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0.008 | |||
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BLAST (Compositional | |||
matrix adjust.) | |||
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46/204 (23%) | |||
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78/204 (38%) | |||
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26/204 (13%) | |||
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Latest revision as of 18:38, 28 April 2017
Manually curated list of paralogous proteins in the E. coli K-12 genome. IN PROGRESS
| Gene | Paralog | Score | E value | Method | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|
|
208 bits (530) |
2e-63 |
BLAST (Compositional matrix adjust.) |
138/368 (38%) |
201/368 (55%) |
5/368 (1%) | ||
|
148 bits (373) |
6e-41 |
BLAST (Compositional matrix adjust.) |
95/284 (33%) |
138/284 (49%) |
1/284 (0%) | ||
|
35.0 bits (79) |
0.008 |
BLAST (Compositional matrix adjust.) |
46/204 (23%) |
78/204 (38%) |
26/204 (13%) | ||