deoB:Quickview: Difference between revisions

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{{Tab On|Quickview|deoB}}{{Tab|Gene|deoB}}{{Tab|Gene Product(s)|deoB}}{{Tab|Expression|deoB}}{{Tab|Evolution|deoB}}{{Tab|On One Page|deoB}}{{TabsBottom}}
{{Tab On|Quickview|deoB}}{{Tab|Gene|deoB}}{{Tab|Gene Product(s)|deoB}}{{Tab|Expression|deoB}}{{Tab|Evolution|deoB}}{{Tab|On One Page|deoB}}{{TabsBottom}}
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{|   id="U49aee38ee8077"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[deoB:Gene|''deoB]]'' (synonyms: ''ECK4375, b4383, JW4346, drm, thyR, tlr'')<ref name='LIB:Riley_2006'/>
''deoB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[deoB:Gene_Product(s)|DeoB product]]<ref name='LIB:Riley_2006'/>: phosphopentomutase<ref name='LIB:Riley_2006'/>, B4383<ref name='LIB:EcoCyc10.6'/>, Tlr<ref name='LIB:EcoCyc10.6'/>, Drm<ref name='LIB:EcoCyc10.6'/>, ThyR<ref name='LIB:EcoCyc10.6'/>, DeoB<ref name='LIB:EcoCyc10.6'/>
''ECK4375, b4383, JW4346, drm, thyR, tlr''<ref name='LIB:Riley_2006'/>, tlr''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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PPENTOMUT-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
PPENTOMUT-
 
Phosphopentomutase; deoxyribouratase<ref name='LIB:EcoGene'/>
 
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''phosphopentomutase <ref name='LIB:Riley_2006'/>, B4383 <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tlr <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Drm <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThyR <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DeoB <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , drm, ECK4375, JW4346, thyR, tlr, b4383''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:deoBD|deoBD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:deoCABD|deoCABD]]<ref name='LIB:EcoCyc10.6'/>, OP00024, deo  
transcription unit(s): [[:Category:Txn_unit:deoBD|deoBD]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:deoCABD|deoCABD]]<ref name='LIB:EcoCyc10.6'/>, OP00024, deo  
|-
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=deoB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10220]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000214&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=deoB&loc=MG1655%3A4617626..4618849,W3110%3A4624283..4625506,REL606%3A4608837..4610060,DH10B%3A4664088..4665311,BW2952%3A4556110..4557333]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4556110&end=4557333&gene=deoB&aa=mkrafimvldsfgigatedaerfgdvgadtlghiaeacakgeadngrkgplnlpnltrlglakahegstgfipagmdgnaevigayawahemssgkdtpsghweiagvpvlfewgyfsdhensfpqelldklveranlpgylgnchssgtvildqlgeehmktgkpifytsadsvfqiacheetfgldklyelceiareeltnggynigrviarpfigdkagnfqrtgnrhdlaveppaptvlqklvdekhgqvvsvgkiadiyancgitkkvkatgldalfdatikemkeagdntivftnfvdfdsswghrrdvagyaaglelfdrrlpelmsllrdddililtadhgcdptwtgtdhtrehipvlvygpkvkpgslghretfadigqtlakyfgtsdmeygkamf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=deoB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=deoB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

deoB

Gene Synonym(s)

ECK4375, b4383, JW4346, drm, thyR, tlr[1], tlr

Product Desc.

PPENTOMUT- Phosphopentomutase; deoxyribouratase[2]

Product Synonyms(s)

phosphopentomutase [1], B4383 [3][1], Tlr [3][1], Drm [3][1], ThyR [3][1], DeoB [3][1] , drm, ECK4375, JW4346, thyR, tlr, b4383

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): deoBD[3], deoCABD[3], OP00024, deo

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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