yjjL:Quickview: Difference between revisions

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{{Tab On|Quickview|yjjL}}{{Tab|Gene|yjjL}}{{Tab|Gene Product(s)|yjjL}}{{Tab|Expression|yjjL}}{{Tab|Evolution|yjjL}}{{Tab|On One Page|yjjL}}{{TabsBottom}}
{{Tab On|Quickview|yjjL}}{{Tab|Gene|yjjL}}{{Tab|Gene Product(s)|yjjL}}{{Tab|Expression|yjjL}}{{Tab|Evolution|yjjL}}{{Tab|On One Page|yjjL}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yjjL:Gene|''yjjL]]'' (synonyms: ''yjiZ, ECK4346, b4356, JW4319'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yjjL''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yjjL:Gene_Product(s)|YjiZ product]]<ref name='LIB:Riley_2006'/>: predicted transporter<ref name='LIB:Riley_2006'/>, B4356<ref name='LIB:EcoCyc10.6'/>, YjjL<ref name='LIB:EcoCyc10.6'/>, YjiZ<ref name='LIB:EcoCyc10.6'/>
''yjiZ, ECK4346, b4356, JW4319''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW4319''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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YjiZ  MFS transporter<ref name='LIB:EcoCyc10.6'/>L-galactonate  MFS transporter<ref name='LIB:EcoCyc11.1'/>
YjiZ  MFS transporter<ref name='LIB:EcoCyc10.6'/>; L-galactonate  MFS transporter<ref name='LIB:EcoCyc11.1'/>
 


L-galactonate transporter; mutants fail to grow on L-galactonate (Reed, 2006); membrane protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted transporter <ref name='LIB:Riley_2006'/>, B4356 <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjjL <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjiZ <ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4346, JW4319, yjiZ, b4356''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:yjiZ|yjiZ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yjiZ|yjiZ]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yjjL&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12587]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002325&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yjjL&loc=MG1655%3A4592745..4591384,W3110%3A4599402..4598041,BW2952%3A4529868..4531229]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4529868&end=4531229&gene=yjjL&aa=mekenitidprssftpsssadipvppdglvqrstrikriqttamlllffaavinyldrsslsvanltireelglsateigallsvfslaygiaqlpcgplldrkgprlmlglgmffwslfqamsgmvhnftqfvlvrigmgigeapmnpcgvkvindwfnikergrpmgffnaastigvavsppilaammlvmgwrgmfitigvlgiflaigwymlyrnrehveltaveqaylnagsvnarrdplsfaewrslfrnrtmwgmmlgfsginytawlylawlpgylqtaynldlkstglmaaipflfgaagmlvngyvtdwlvkggmapiksrkiciiagmfcsaaftlivpqattsmtavlligmalfcihfagtscwglihvavasrmtasvgsiqnfasficasfapiitgfivdtthsfrlaliicgcvtaagalayiflvrqpindprkd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjjL+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yjjL]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Major Facilitator Superfamily (MFS). Evidence for transport function is indirect: mutants  fail to grow on D-galactonate and YjjL is an MFS transporter family member. Upregulated during growth on D-galactonate (Reed, 2006).<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yjjL

Gene Synonym(s)

yjiZ, ECK4346, b4356, JW4319[1][2], JW4319

Product Desc.

YjiZ MFS transporter[2]; L-galactonate MFS transporter[3]

L-galactonate transporter; mutants fail to grow on L-galactonate (Reed, 2006); membrane protein[4]

Product Synonyms(s)

predicted transporter [1], B4356 [2][1], YjjL [2][1], YjiZ [2][1] , ECK4346, JW4319, yjiZ, b4356

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjiZ[2]

Regulation/Activity
Quick Links



        

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Notes

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Major Facilitator Superfamily (MFS). Evidence for transport function is indirect: mutants fail to grow on D-galactonate and YjjL is an MFS transporter family member. Upregulated during growth on D-galactonate (Reed, 2006).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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