ytfR:Quickview: Difference between revisions

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{{Tab On|Quickview|ytfR}}{{Tab|Gene|ytfR}}{{Tab|Gene Product(s)|ytfR}}{{Tab|Expression|ytfR}}{{Tab|Evolution|ytfR}}{{Tab|On One Page|ytfR}}{{TabsBottom}}
{{Tab On|Quickview|ytfR}}{{Tab|Gene|ytfR}}{{Tab|Gene Product(s)|ytfR}}{{Tab|Expression|ytfR}}{{Tab|Evolution|ytfR}}{{Tab|On One Page|ytfR}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ytfR:Gene|''ytfR]]'' (synonyms: ''ECK4224, b4485, JW5752, ytfS, b4228 (obsolete), b4229 (obsolete)'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ytfR''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ytfR:Gene_Product(s)|YtfR product]]<ref name='LIB:Riley_2006'/>: predicted sugar transporter subunit: ATP-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4485<ref name='LIB:EcoCyc10.6'/>, YtfS<ref name='LIB:EcoCyc10.6'/>, YtfR<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:YtfQ/YtfR/YtfS/YtfT/YjfF ABC transporter|YtfQ/YtfR/YtfS/YtfT/YjfF ABC transporter]]<ref name='LIB:EcoCyc10.6'/>
''ECK4224, b4485, JW5752, ytfS, b4228 (obsolete), b4229 (obsolete)''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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YtfR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
YtfR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:YtfQ/YtfR/YtfS/YtfT/YjfF ABC transporter|YtfQ/YtfR/YtfS/YtfT/YjfF ABC transporter]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Putative ABC transporter ATP-binding protein; function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted sugar transporter subunit: ATP-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B4485<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YtfS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YtfR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4224, JW5752, ytfS, b4485''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ytfQ|ytfQ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ytfQ|ytfQ]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ytfR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12518]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002313&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ytfR&loc=MG1655%3A4449081..4450583,W3110%3A4455738..4457240,REL606%3A4434308..4435810,DH10B%3A4549443..4550945,BW2952%3A4387816..4389318]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4387816&end=4389318&gene=ytfR&aa=mttdqhqeilrteglskffpgvkaldnvdfslrrgeimallgengagkstlikaltgvyhadrgtiwlegqaispkntahaqqlgigtvyqevnllpnmsvadnlfigrepkrfgllrrkemekratelmasygfsldvreplnrfsvamqqivaicraidlsakvlildeptasldtqevellfdlmrqlrdrgvslifvthfldqvyqvsdritvlrngsfvgcretcelpqielvkmmlgreldthalqragrtllsdkpvaafknygkkgtiapfdlevrpgeivglagllgsgrtetaevifgikpadsgtalikgkpqnlrsphqasvlgigfcpedrktdgiiaaasvreniilalqaqrgwlrpisrkeqqeiaerfirqlgirtpsteqpieflsggnqqkvllsrwlltrpqflildeptrgidvgahaeiirlietlcadglallvisseleelvgyadrviimrdrkqvaeiplaelsvpaimnaiaa]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ytfR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ytfR]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Putative YjfF-YtfTRQ ABC transport system.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:39, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ytfR

Gene Synonym(s)

ECK4224, b4485, JW5752, ytfS, b4228 (obsolete), b4229 (obsolete)[1][2]

Product Desc.

YtfR[2][3];

Component of YtfQ/YtfR/YtfS/YtfT/YjfF ABC transporter[2][3]

Putative ABC transporter ATP-binding protein; function unknown[4]

Product Synonyms(s)

predicted sugar transporter subunit: ATP-binding component of ABC superfamily[1], B4485[2][1], YtfS[2][1], YtfR[2][1] , ECK4224, JW5752, ytfS, b4485

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ytfQ[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Putative YjfF-YtfTRQ ABC transport system.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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