yjeK:Quickview: Difference between revisions

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{{Tab On|Quickview|yjeK}}{{Tab|Gene|yjeK}}{{Tab|Gene Product(s)|yjeK}}{{Tab|Expression|yjeK}}{{Tab|Evolution|yjeK}}{{Tab|On One Page|yjeK}}{{TabsBottom}}
{{Tab On|Quickview|yjeK}}{{Tab|Gene|yjeK}}{{Tab|Gene Product(s)|yjeK}}{{Tab|Expression|yjeK}}{{Tab|Evolution|yjeK}}{{Tab|On One Page|yjeK}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yjeK:Gene|''yjeK]]'' (synonyms: ''ECK4140, b4146, JW4106'')<ref name='LIB:Riley_2006'/>
''yjeK''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yjeK:Gene_Product(s)|YjeK product]]<ref name='LIB:Riley_2006'/>: predicted lysine aminomutase<ref name='LIB:Riley_2006'/>, B4146<ref name='LIB:EcoCyc10.6'/>, YjeK<ref name='LIB:EcoCyc10.6'/>
''ECK4140, b4146, JW4106''<ref name='LIB:Riley_2006'/>, JW4106''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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lysine 2,3-aminomutase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
lysine 2,3-aminomutase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Weak lysine 2,3-aminomutase activity<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted lysine aminomutase<ref name='LIB:Riley_2006'/>, B4146<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4140, JW4106, b4146''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:yjeK|yjeK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yjeK|yjeK]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yjeK&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yjeK&loc=MG1655%3A4373680..4372652,W3110%3A4380337..4379309,REL606%3A4354368..4353340,BW2952%3A4311387..4312415]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4311387&end=4312415&gene=yjeK&aa=mahivtlntpsredwltqladvvtdpdellrllnidaeekllagrsakklfalrvprsfidrmekgnpddpllrqvltsqdefviapgfstdpleeqhsvvpgllhkyhnralllvkggcavncrycfrrhfpyaenqgnkrnwqtaleyvaahpeldemifsggdplmakdheldwlltqleaiphikrlrihsrlpiviparitealvecfarstlqillvnhinhanevdetfrqamaklrrvgvtllnqsvllrdvndnaqtlanlsnalfdagvmpyylhvldkvqgaahfmvsddearqimrelltlvsgylvpklareiggepsktpldlqlrqq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjeK+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yjeK]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
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YjeK is a homolog of Clostridium subterminale KamA lysine 2,3-aminomutase activity, but its specific activity is only 0.1% of that of KamA, which may indicate the physiological substrate for YjeK  is still unknown (Behshad, 2006). AFMB Structural Genomics target No. (http://afmb.cnrs-mrs.fr/article171.html). Radical SAM superfamily.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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<references/>
<references/>
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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yjeK

Gene Synonym(s)

ECK4140, b4146, JW4106[1], JW4106

Product Desc.

lysine 2,3-aminomutase[2][3]

Weak lysine 2,3-aminomutase activity[4]

Product Synonyms(s)

predicted lysine aminomutase[1], B4146[2][1], YjeK[2][1] , ECK4140, JW4106, b4146

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjeK[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


YjeK is a homolog of Clostridium subterminale KamA lysine 2,3-aminomutase activity, but its specific activity is only 0.1% of that of KamA, which may indicate the physiological substrate for YjeK is still unknown (Behshad, 2006). AFMB Structural Genomics target No. (http://afmb.cnrs-mrs.fr/article171.html). Radical SAM superfamily.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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