tyrB:Quickview: Difference between revisions

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{{Tab On|Quickview|tyrB}}{{Tab|Gene|tyrB}}{{Tab|Gene Product(s)|tyrB}}{{Tab|Expression|tyrB}}{{Tab|Evolution|tyrB}}{{Tab|On One Page|tyrB}}{{TabsBottom}}
{{Tab On|Quickview|tyrB}}{{Tab|Gene|tyrB}}{{Tab|Gene Product(s)|tyrB}}{{Tab|Expression|tyrB}}{{Tab|Evolution|tyrB}}{{Tab|On One Page|tyrB}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[tyrB:Gene|''tyrB]]'' (synonyms: ''ECK4046, b4054, JW4014'')<ref name='LIB:Riley_2006'/>
''tyrB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[tyrB:Gene_Product(s)|TyrB product]]<ref name='LIB:Riley_2006'/>: tyrosine aminotransferase, tyrosine-repressible, PLP-dependent<ref name='LIB:Riley_2006'/>, B4054<ref name='LIB:EcoCyc10.6'/>, TyrB<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:TYRB-DIMER|TYRB-DIMER]]<ref name='LIB:EcoCyc10.6'/>
''ECK4046, b4054, JW4014''<ref name='LIB:Riley_2006'/>, JW4014''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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TyrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
TyrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:TYRB-DIMER|TYRB-DIMER]]<ref name='LIB:EcoCyc10.6'/>; [[:Category:Complex:TYRB-DIMER|tyrosine aminotransferase]]<ref name='LIB:EcoCyc11.1'/>


Tyrosine aminotransferase; aromatic amino acid aminotransferase; phenylalanine aminotransferase; dicarboxylic amino acid aminotransferase; homodimeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''tyrosine aminotransferase, tyrosine-repressible, PLP-dependent<ref name='LIB:Riley_2006'/>, B4054<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TyrB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4046, JW4014, b4054''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:tyrB|tyrB]]<ref name='LIB:EcoCyc10.6'/>, OP00123  
transcription unit(s): [[:Category:Txn_unit:tyrB|tyrB]]<ref name='LIB:EcoCyc10.6'/>, OP00123  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tyrB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11040]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001029&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tyrB&loc=MG1655%3A4265137..4266330,W3110%3A4270704..4271897,DH10B%3A4364833..4366026,REL606%3A4246046..4247239,BW2952%3A4203982..4205175]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4203982&end=4205175&gene=tyrB&aa=mfqkvdayagdpiltlmerfkedprsdkvnlsiglyynedgiipqlqavaeaearlnaqphgaslylpmeglncyrhaiapllfgadhpvlkqqrvatiqtlggsgalkvgadflkryfpesgvwvsdptwenhvaifagagfevstypwydeatngvrfndllatlktlparsivllhpcchnptgadltndqwdavieilkarelipfldiayqgfgagmeedayairaiasaglpalvsnsfskifslygervgglsvmcedaeaagrvlgqlkatvrrnyssppnfgaqvvaavlndealkaswlaeveemrtrilamrqelvkvlstempernfdyllnqrgmfsytglsaaqvdrlreefgvyliasgrmcvaglntanvqrvakafaavm]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tyrB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tyrB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
tyrB is in the TyrR regulon.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tyrB

Gene Synonym(s)

ECK4046, b4054, JW4014[1], JW4014

Product Desc.

TyrB[2][3];

Component of TYRB-DIMER[2]; tyrosine aminotransferase[3]

Tyrosine aminotransferase; aromatic amino acid aminotransferase; phenylalanine aminotransferase; dicarboxylic amino acid aminotransferase; homodimeric[4]

Product Synonyms(s)

tyrosine aminotransferase, tyrosine-repressible, PLP-dependent[1], B4054[2][1], TyrB[2][1] , ECK4046, JW4014, b4054

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tyrB[2], OP00123

Regulation/Activity
Quick Links



        

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Notes

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tyrB is in the TyrR regulon.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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