ydiN:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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{| id="V49b02d5a5341e" class=" tableEdit New_Quickview_Table" | {| id="V49b02d5a5341e" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1689, b1691, JW5274''<ref name='LIB:Riley_2006'/> | ''ECK1689, b1691, JW5274''<ref name='LIB:Riley_2006'/>, JW5274'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted transporter<ref name='LIB:Riley_2006'/>, B1691<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdiN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''predicted transporter<ref name='LIB:Riley_2006'/>, B1691<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdiN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1689, JW5274, b1691'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=ydiN&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydiN&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6917]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003505&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydiN&loc=MG1655%3A1770536..1771801,W3110%3A1774226..1775491,DH10B%3A1861107..1862372,REL606%3A1749778..1751043,BW2952%3A1662589..1663860]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1662589&end=1663860&gene=ydiN&aa=mkmsqnkafstpfilavlciyfsyflhgisvitlaqnmsslaekfstdnagiaylisgiglgrlisilffgvisdkfgrravilmavimyllfffgipacpnltlayglavcvgiansaldtggypalmecfpkasgsavilvkamvsfgqmfypmlvsymllnniwygygliipgilfvlitlmllkskfpsqlvdasvtnelpqmnskplvwlegvssvlfgvaafstfyvivvwmpkyamafagmseaealktisyysmgslvcvfifaallkkmvrpiwanvfnsalatitaaiiylypsplvcnagafvigfsaaggilqlgvsvmseffpkskakvtsiymmmgglanfviplitgylsniglqyiivldftfallalitaiivfiryyrvfiipendvrfgerkfctrlntikhrg]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydiN+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydiN]] | ||
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Latest revision as of 21:42, 27 May 2013
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ydiN |
|---|---|
| Gene Synonym(s) |
ECK1689, b1691, JW5274[1], JW5274 |
| Product Desc. |
YdiN MFS transporter[2]; putative amino acid/amine MFS transporter[3] Putative transporter, function unknown; membrane protein; upregulated in shikimate-producer during carbon starvation[4] |
| Product Synonyms(s) |
predicted transporter[1], B1691[2][1], YdiN[2][1] , ECK1689, JW5274, b1691 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Major Facilitator Superfamily (MFS). YdiN is upregulated in shikimate-producer during carbon starvation (Johansson, 2006). ydiN is in an operon with shikimate genes ydiB and aroD. YdiN may be involved in the transport of shikimate or byproducts (quinic acid and 3-dehydroshikimic acid) of its overproduction: a second transport system for shikimate has not yet been mapped (Brown, 1976; Knop, 2001).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.