ttdR:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ygiP, ECK3050, b3060, JW3032''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ygiP, ECK3050, b3060, JW3032''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, dan, JW3032''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, TtdR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B3060<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, TtdR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B3060<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , dan, ECK3050, JW3032, ygiP, b3060''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=ttdR&s=search PortEco search(ttdR)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=ttdR&loc=MG1655:3204278..3203346,W3110:3204912..3203980,BW2952:3090494..3091426 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3090494&end=3091426&gene=ttdR&aa=mlnswplakdlqvlveivhsgsfsaaaatlgqtpafvtkriqilentlattllnrsargvaltesgqrcyehaleiltqyqrlvddvtqiktrpegmirigcsfgfgrshiapaitelmrnypelqvhfelfdrqidlvqdnidldirindeipdyyiahlltknkrilcaapeylqkypqpqslqelsrhdclvtkerdmthgiwelgngqekksvkvsghlssnsgeivlqwalegkgimlrsewdvlpflesgklvqvlpeyaqsaniwavyreplyrsmklrvcveflaawcqqrlgkpdegyqvm Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ttdR+AND+escherichia+coli Pubmed(ttdR)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ttdR Textpresso(ttdR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ttdR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12694]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002359&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ttdR&loc=MG1655%3A3204278..3203346,W3110%3A3204912..3203980,BW2952%3A3090494..3091426]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3090494&end=3091426&gene=ttdR&aa=mlnswplakdlqvlveivhsgsfsaaaatlgqtpafvtkriqilentlattllnrsargvaltesgqrcyehaleiltqyqrlvddvtqiktrpegmirigcsfgfgrshiapaitelmrnypelqvhfelfdrqidlvqdnidldirindeipdyyiahlltknkrilcaapeylqkypqpqslqelsrhdclvtkerdmthgiwelgngqekksvkvsghlssnsgeivlqwalegkgimlrsewdvlpflesgklvqvlpeyaqsaniwavyreplyrsmklrvcveflaawcqqrlgkpdegyqvm]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ttdR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ttdR]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ttdR

Gene Synonym(s)

ygiP, ECK3050, b3060, JW3032[1][2], dan, JW3032

Product Desc.

predicted DNA-binding transcriptional regulator LYSR-type[2][3]

Transcriptional activator of ttdAB-ygjE, tartrate-inducible; required for tartrate utilization [4]

Product Synonyms(s)

predicted DNA-binding transcriptional regulator[1], TtdR[2][1], B3060[2][1], YgiP[2][1] , dan, ECK3050, JW3032, ygiP, b3060

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ttdR[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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LysR family.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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