chbB:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1736, b1738, JW1727, celA''<ref name='LIB:Riley_2006'/> | ''ECK1736, b1738, JW1727, celA''<ref name='LIB:Riley_2006'/>, celA'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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N,N'-diacetylchitobiose-specific enzyme IIB component of PTS<ref name='LIB:Riley_2006'/>, B1738<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''N,N'-diacetylchitobiose-specific enzyme IIB component of PTS<ref name='LIB:Riley_2006'/>, B1738<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChbB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CelA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , celA, ECK1736, JW1727, b1738'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=chbB&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=chbB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10140]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000136&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=chbB&loc=MG1655%3A1819643..1819323,W3110%3A1823333..1823013,DH10B%3A1910214..1909894,BW2952%3A1711382..1711702]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1711382&end=1711702&gene=chbB&aa=mekkhiylfcsagmstsllvskmraqaekyevpviieafpetlagekgqnadvvllgpqiaymlpeiqrllpnkpvevidsllygkvdglgvlkaavaaikkaaan]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=chbB+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=chbB]] | ||
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Latest revision as of 21:52, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
chbB |
|---|---|
| Gene Synonym(s) |
ECK1736, b1738, JW1727, celA[1], celA |
| Product Desc. |
N,N'-diacetylchitobiose utilization, enzyme IIB(Chb) of the PTS transport system[4] |
| Product Synonyms(s) |
N,N'-diacetylchitobiose-specific enzyme IIB component of PTS[1], B1738[2][1], ChbB[2][1], CelA[2][1] , celA, ECK1736, JW1727, b1738 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The chb operon is induced by N,N'-diacetylchitobiose. The chb operon was previously thought to encode a cryptic cel operon for a cellobiose degradation system. The Cel+ phenotype is due to mutations making expression chitobiose-independent, but a fully induced operon did not support growth on cellobiose, implying a mutation altering the substrate specificity is needed; several candidate mutations were noted in Genbank, but not proven to alter the specificity of the system (Keyhani, 1997). In contrast, a later study claim that mutations making the operon expression high-level constitutive by chbR and nagC mutations are sufficient for the Cel+ phenotype and that no mutations altering substrate specificity are required (Kachroo, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.