rfaP:Quickview: Difference between revisions

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{{Tab On|Quickview|rfaP}}{{Tab|Gene|rfaP}}{{Tab|Gene Product(s)|rfaP}}{{Tab|Expression|rfaP}}{{Tab|Evolution|rfaP}}{{Tab|On One Page|rfaP}}{{TabsBottom}}
{{Tab On|Quickview|rfaP}}{{Tab|Gene|rfaP}}{{Tab|Gene Product(s)|rfaP}}{{Tab|Expression|rfaP}}{{Tab|Evolution|rfaP}}{{Tab|On One Page|rfaP}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rfaP:Gene|''rfaP]]'' (synonyms: ''ECK3620, b3630, JW3605, waaP'')<ref name='LIB:Riley_2006'/>
''rfaP''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rfaP:Gene_Product(s)|RfaP product]]<ref name='LIB:Riley_2006'/>: kinase that phosphorylates core heptose of lipopolysaccharide<ref name='LIB:Riley_2006'/>, B3630<ref name='LIB:EcoCyc10.6'/>, WaaP<ref name='LIB:EcoCyc10.6'/>, RfaP<ref name='LIB:EcoCyc10.6'/>
''ECK3620, b3630, JW3605, waaP''<ref name='LIB:Riley_2006'/>, waaP''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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lipopolysaccharide core biosynthesis; phosphorylation of core heptose<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
lipopolysaccharide core biosynthesis; phosphorylation of core heptose<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Lipopolysaccharide kinase; LPS core biosynthesis; phosphorylation of core<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''kinase that phosphorylates core heptose of lipopolysaccharide<ref name='LIB:Riley_2006'/>, B3630<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RfaP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3620, JW3605, waaP, b3630''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rfaP&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rfaP&loc=MG1655%3A3803973..3803176,W3110%3A3834465..3835262,DH10B%3A3901550..3900753,BW2952%3A3691502..3692299]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3691502&end=3692299&gene=rfaP&aa=mvelkeplatlwrgkdafaevkklngevfreletrrtlrfelsgksyflkwhkgttlkeiiknllslrmpvlgadrewhaihrlsdvgvdtmkgigfgekglnpltrasfiitedltptisledycadwavnppdirvkrmliarvatmvrkmhtaginhrdcyichfllhlpftgredelkisvidlhraqirakvprrwrdkdliglyfssmnigltqrdiwrfmkvyfgmplrkilsleqnllnmasvkaerikertqrkgl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rfaP+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rfaP]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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<references/>
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rfaP

Gene Synonym(s)

ECK3620, b3630, JW3605, waaP[1], waaP

Product Desc.

lipopolysaccharide core biosynthesis; phosphorylation of core heptose[2][3]

Lipopolysaccharide kinase; LPS core biosynthesis; phosphorylation of core[4]

Product Synonyms(s)

kinase that phosphorylates core heptose of lipopolysaccharide[1], B3630[2][1], WaaP[2][1], RfaP[2][1] , ECK3620, JW3605, waaP, b3630

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rfaQGPSBIJYZK[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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