rfaI:Quickview: Difference between revisions

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{{Tab On|Quickview|rfaI}}{{Tab|Gene|rfaI}}{{Tab|Gene Product(s)|rfaI}}{{Tab|Expression|rfaI}}{{Tab|Evolution|rfaI}}{{Tab|On One Page|rfaI}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rfaI:Gene|''rfaI]]'' (synonyms: ''ECK3617, b3627, JW3602, waaI, waaO'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''rfaI''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rfaI:Gene_Product(s)|RfaI product]]<ref name='LIB:Riley_2006'/>: UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase<ref name='LIB:Riley_2006'/>, B3627<ref name='LIB:EcoCyc10.6'/>, WaaO<ref name='LIB:EcoCyc10.6'/>, WaaI<ref name='LIB:EcoCyc10.6'/>, RfaI<ref name='LIB:EcoCyc10.6'/>, UDP-D-galactose:(glucosyl)lipopolysaccharide-&alpha;-1,3-D-galactosyltransferase<ref name='LIB:EcoCyc10.6'/>
''ECK3617, b3627, JW3602, waaI, waaO''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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UDP-D-glucose:(glucosyl)LPS &alpha;-1,3-glucosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
UDP-D-glucose:(glucosyl)LPS &alpha;-1,3-glucosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
UDP-D-galactose: (glucosyl)LPS-1,3-D-galactosyltransferase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase<ref name='LIB:Riley_2006'/>, B3627<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RfaI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UDP-D-galactose:(glucosyl)lipopolysaccharide-&alpha;-1,3-D-galactosyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3617, JW3602, waaI, b3627''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rfaQGPSBIJYZK|rfaQGPSBIJYZK]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rfaI&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rfaI&loc=MG1655%3A3801081..3800062,W3110%3A3837357..3838376,DH10B%3A3898658..3897639,BW2952%3A3688388..3689407]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3688388&end=3689407&gene=rfaI&aa=mqqvffqeteflnsvidydhkvetenlcldiaygtdknflfgcgisiasilkynegsrlcfhiftdyfgdddrkyfdalalqyktrikiylingdrlrslpstknwthaiyfrfviadyfinkapkvlyldadiicqgtieplinfsfpddkvamvvtegqadwwekrahslgvagiakgyfnsgfllintaqwaaqqvsaraiamlnepeiikkithpdqdvlnmlladklifadikyntqfslnyqlkesfinpvtndtifihyigptkpwhdwawdypvsqafmeaknaspwkntallkpnnsnqlrysakhmlkkhrylkgfsnylfyfiekikh]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rfaI+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rfaI]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rfaI

Gene Synonym(s)

ECK3617, b3627, JW3602, waaI, waaO[1][2]

Product Desc.

UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase[2][3]

UDP-D-galactose: (glucosyl)LPS-1,3-D-galactosyltransferase[4]

Product Synonyms(s)

UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase[1], B3627[2][1], WaaO[2][1], WaaI[2][1], RfaI[2][1], UDP-D-galactose:(glucosyl)lipopolysaccharide-α-1,3-D-galactosyltransferase[2][1] , ECK3617, JW3602, waaI, b3627

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rfaQGPSBIJYZK[2]

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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