ypjD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2608, b2611, JW2592''<ref name='LIB:Riley_2006'/>
''ECK2608, b2611, JW2592''<ref name='LIB:Riley_2006'/>, corE, JW2592''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted inner membrane protein<ref name='LIB:Riley_2006'/>, B2611<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YpjD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted inner membrane protein<ref name='LIB:Riley_2006'/>, B2611<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YpjD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , corE, ECK2608, JW2592, b2611''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=ypjD&s=search PortEco search(ypjD)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=ypjD&loc=MG1655:2745909..2746775,W3110:2746543..2747409,REL606:2669182..2670048,BW2952:2631796..2632587 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2631796&end=2632587&gene=ypjD&aa=mqrleqrspdailllfliaqtvditmpvfallalvaysvslalivpgllqknggwrrmaiisavialvchaialearilpdgdsgqnlsllnvgslvslmictvmtivasrnrgwlllpivyafalinlalatfmpneyithleatpgmlvhiglslfsyatliiaalyalqlawidyqlknkklafnqempplmsierkmfhitqigvvlltltlctglfymhnlfsmenidkavlsivawfvyivllwghyhegwrgrrvvwfnvagaviltlayfgsrivqqlis Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ypjD+AND+escherichia+coli Pubmed(ypjD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=ypjD Textpresso(ypjD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ypjD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7355]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003924&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ypjD&loc=MG1655%3A2745909..2746775,W3110%3A2746543..2747409,REL606%3A2669182..2670048,BW2952%3A2631796..2632587]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2631796&end=2632587&gene=ypjD&aa=mqrleqrspdailllfliaqtvditmpvfallalvaysvslalivpgllqknggwrrmaiisavialvchaialearilpdgdsgqnlsllnvgslvslmictvmtivasrnrgwlllpivyafalinlalatfmpneyithleatpgmlvhiglslfsyatliiaalyalqlawidyqlknkklafnqempplmsierkmfhitqigvvlltltlctglfymhnlfsmenidkavlsivawfvyivllwghyhegwrgrrvvwfnvagaviltlayfgsrivqqlis]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ypjD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ypjD]]&nbsp;&nbsp;


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Latest revision as of 21:39, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ypjD

Gene Synonym(s)

ECK2608, b2611, JW2592[1], corE, JW2592

Product Desc.

predicted inner membrane protein[2][3]

Function unknown; eight predicted transmembrane helices[4]

Product Synonyms(s)

predicted inner membrane protein[1], B2611[2][1], YpjD[2][1] , corE, ECK2608, JW2592, b2611

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ypjD[2]

Regulation/Activity
Quick Links



        

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Notes

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The Salmonella ortholog was named as corE in Genbank AF130857. Homologous to cytochrome c-type biogenesis gene ccsA, magnesium-chelatase subunit gene chlI, and heme-exporter gene hemX.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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