ybgE:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0724, b0735, JW0725''<ref name='LIB:Riley_2006'/> | ''ECK0724, b0735, JW0725''<ref name='LIB:Riley_2006'/>, JW0725'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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conserved inner membrane protein<ref name='LIB:Riley_2006'/>, B0735<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''conserved inner membrane protein<ref name='LIB:Riley_2006'/>, B0735<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbgE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0724, JW0725, b0735'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=ybgE&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ybgE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12395]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002258&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ybgE&loc=MG1655%3A773532..773825,W3110%3A774731..775024,DH10B%3A826124..826417,REL606%3A755191..755484,BW2952%3A676292..676585]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=676292&end=676585&gene=ybgE&aa=mskiiatlyavmdkrplralsfvmalllagcmfwdpsrfaaktseleiwhglllmwavcagvihgvgfrpqkvlwqgifcplladivlivgliffff]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ybgE+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ybgE]] | ||
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Latest revision as of 21:44, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ybgE |
|---|---|
| Gene Synonym(s) |
ECK0724, b0735, JW0725[1], JW0725 |
| Product Desc. |
conserved hypothetical protein[2]; putative lipoprotein[3] Function unknown, cydAB operon, expressed in minicells[4] |
| Product Synonyms(s) |
conserved inner membrane protein[1], B0735[2][1], YbgE[2][1] , ECK0724, JW0725, b0735 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Ambiguous lipoprotein prediction, Cys somewhat conserved but no LipoP or PATOSEQ predictions. YbgE might be a membrane protein. Alternative predicted start at codon 12 gives much better, but still ambigous signal predictions.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.