lsrR:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ydeW, ECK1505, b1512, JW1505''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ydeW, ECK1505, b1512, JW1505''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW1505''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1512<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LsrR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, predicted DNA-binding transcriptional regulator, sorC family<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1512<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LsrR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, predicted DNA-binding transcriptional regulator, sorC family<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1505, JW1505, ydeW, b1512''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=lsrR&s=search PortEco search(lsrR)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=lsrR&loc=MG1655:1599265..1598312,W3110:1602955..1602002,DH10B:1688890..1687937,BW2952:1490371..1491324 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1490371&end=1491324&gene=lsrR&aa=mtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqdtaaailrs Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lsrR+AND+escherichia+coli Pubmed(lsrR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=lsrR Textpresso(lsrR)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lsrR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6799]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003388&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lsrR&loc=MG1655%3A1599265..1598312,W3110%3A1602955..1602002,DH10B%3A1688890..1687937,BW2952%3A1490371..1491324]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1490371&end=1491324&gene=lsrR&aa=mtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqdtaaailrs]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lsrR+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lsrR]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lsrR

Gene Synonym(s)

ydeW, ECK1505, b1512, JW1505[1][2], JW1505

Product Desc.

LcrR transcriptional repressor[2]; LsrR transcriptional repressor[3]

lsrACDBFGE operon regulator for autoinducer-2 (AI-2) uptake; induced by phospho-AI-2[4]

Product Synonyms(s)

predicted DNA-binding transcriptional regulator[1], B1512[2][1], YdeW[2][1], LsrR[2][1], predicted DNA-binding transcriptional regulator, sorC family[2][1] , ECK1505, JW1505, ydeW, b1512

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydeW[2]

Regulation/Activity
Quick Links



        

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Notes

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LsrR is also involved in a DHAP repression of the lsr operon. LsrR is paralogous to the ribose transport regulator RbsR.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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