gltX:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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glutamyl-tRNA synthetase<ref name='LIB:Riley_2006'/>, B2400<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''glutamyl-tRNA synthetase<ref name='LIB:Riley_2006'/>, B2400<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GltX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2394, JW2395, b2400''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=gltX&s=search PortEco search(gltX)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=gltX&loc=MG1655:2518694..2517279,W3110:2526118..2524703,DH10B:2610459..2609044,REL606:2453548..2452133,BW2952:2403084..2404499 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2403084&end=2404499&gene=gltX&aa=mkiktrfapsptgylhvggartalyswlfarnhggefvlriedtdlerstpeaieaimdgmnwlslewdegpyyqtkrfdrynavidqmleegtaykcycskerlealreeqmakgekprydgrcrhshehhaddepcvvrfanpqegsvvfddqirgpiefsnqelddliirrtdgsptynfcvvvddwdmeithvirgedhinntprqinilkalkapvpvyahvsmingddgkklskrhgavsvmqyrddgylpeallnylvrlgwshgdqeiftreemikyftlnavsksasafntdkllwlnhhyinalppeyvathlqwhieqenidtrngpqladlvkllgercktlkemaqscryfyedfaefdadaakkhlrpvarqplevvrdklaaitdwtaenvhhaiqatadelevgmgkvgmplrvavtgagqspaldvtvhaigktrsierinkaldfiaerenqq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gltX+AND+escherichia+coli Pubmed(gltX)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=gltX Textpresso(gltX)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=gltX&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10407]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000400&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=gltX&loc=MG1655%3A2518694..2517279,W3110%3A2526118..2524703,DH10B%3A2610459..2609044,REL606%3A2453548..2452133,BW2952%3A2403084..2404499]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2403084&end=2404499&gene=gltX&aa=mkiktrfapsptgylhvggartalyswlfarnhggefvlriedtdlerstpeaieaimdgmnwlslewdegpyyqtkrfdrynavidqmleegtaykcycskerlealreeqmakgekprydgrcrhshehhaddepcvvrfanpqegsvvfddqirgpiefsnqelddliirrtdgsptynfcvvvddwdmeithvirgedhinntprqinilkalkapvpvyahvsmingddgkklskrhgavsvmqyrddgylpeallnylvrlgwshgdqeiftreemikyftlnavsksasafntdkllwlnhhyinalppeyvathlqwhieqenidtrngpqladlvkllgercktlkemaqscryfyedfaefdadaakkhlrpvarqplevvrdklaaitdwtaenvhhaiqatadelevgmgkvgmplrvavtgagqspaldvtvhaigktrsierinkaldfiaerenqq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gltX+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=gltX]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

gltX

Gene Synonym(s)

ECK2394, b2400, JW2395, gltM, gluRS, G259[1][2]

Product Desc.

Glutamate--tRNA ligase[3]

Product Synonyms(s)

glutamyl-tRNA synthetase[1], B2400[2][1], GltM[2][1], GltX[2][1] , ECK2394, JW2395, b2400

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gltX[2]

Regulation/Activity
Quick Links



        

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Notes

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The zinc binding motif Cys98-x-Cys100-x(24)-Cys125-x-H127 of GltX categorizes this as a SWIM domain (standard C-x-C-x(n)-C-x-H with n=6-25). Mutation analysis (C100Y) indicates SWIM plays a minimal role in overall binding of tRNA, but an increased role in orientation of the acceptor 3?-terminal adenosine.[3]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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