lyxK:Quickview: Difference between revisions

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{{Tab On|Quickview|lyx}}{{Tab|Gene|lyx}}{{Tab|Gene Product(s)|lyx}}{{Tab|Expression|lyx}}{{Tab|Evolution|lyx}}{{Tab|On One Page|lyx}}{{TabsBottom}}
{{Tab On|Quickview|lyxK}}{{Tab|Gene|lyxK}}{{Tab|Gene Product(s)|lyxK}}{{Tab|Expression|lyxK}}{{Tab|Evolution|lyxK}}{{Tab|On One Page|lyxK}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lyx:Gene|''lyx]]'' (synonyms: ''lyxK, ECK3569, b3580, JW3552, yiaP, sgbK, xylK, xyl'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''lyxK''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lyx:Gene_Product(s)|LyxK product]]<ref name='LIB:Riley_2006'/>: L-xylulose kinase<ref name='LIB:Riley_2006'/>, B3580<ref name='LIB:EcoCyc10.6'/>, XylK<ref name='LIB:EcoCyc10.6'/>, Xyl<ref name='LIB:EcoCyc10.6'/>, Lyx<ref name='LIB:EcoCyc10.6'/>, YiaP<ref name='LIB:EcoCyc10.6'/>, SgbK<ref name='LIB:EcoCyc10.6'/>, LyxK<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:L-xylulose kinase|L-xylulose kinase]]<ref name='LIB:EcoCyc10.6'/>
''lyxKK, ECK3569, b3580, JW3552, yiaP, sgbK, xylK, xyl'', lyx<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>, lyx''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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LyxK<ref name='LIB:EcoCyc10.6'/>L-xylulose kinase<ref name='LIB:EcoCyc11.1'/>
LyxK<ref name='LIB:EcoCyc10.6'/>; L-xylulose kinase<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:L-xylulose kinase|L-xylulose kinase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


L-xylulose kinase; novel pathway for utilization of lyxKose via xylulose through rhamnose and pentose pathways; 3-keto-L-gulonate kinase; possibly involved in the utilization of L-dehydroascorbate (2,3-diketo-L-gulonate)<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''L-xylulose kinase<ref name='LIB:Riley_2006'/>, B3580<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XylK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Xyl<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lyx<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YiaP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SgbK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LyxK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3569, JW3552, lyx, xylK, yiaP, b3580''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:yiaKLMNO-lyxK-sgbHUE|yiaKLMNO-lyxK-sgbHUE]]<ref name='LIB:EcoCyc10.6'/>, yiaKLMNOPQRS  
transcription unit(s): [[:Category:Txn_unit:yiaKLMNO-lyxKK-sgbHUE|yiaKLMNO-lyxKK-sgbHUE]]<ref name='LIB:EcoCyc10.6'/>, yiaKLMNOPQRS  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lyx&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lyx&loc=MG1655%3A3745107..3746603,W3110%3A3893331..3891835,REL606%3A3677540..3679036,BW2952%3A3633433..3634929]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3633433&end=3634929&gene=lyx&aa=mtqywlgldcggswlkaglydregreagvqrlplcalspqpgwaerdmaelwqccmavirallthsgvsgeqivgigisaqgkglflldkndkplgnailssdrrameivrrwqedgipeklypltrqtlwtghpvsllrwlkeheperyaqigcvmmthdylrwcltgvkgceesnisesnlynmslgeydpcltdwlgiaeinhalppvvgsaeicgeitaqtaaltglkagtpvvgglfdvvstalcagiedeftlnavmgtwavtsgitrglrdgeahpyvygryvndgefivheasptssgnlewftaqwgeisfdeinqavaslpkaggdlfflpflygsnaglemtsgfygmqaihtrahllqaiyegvvfshmthlnrmrerftdvhtlrvtggpahsdvwmqmladvsglrielpqveetgcfgaalaarvgtgvyhnfseaqrdlrhpvrtllpdmtahqlyqkkyqryqhliaalqgfharikehtl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lyx+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lyx]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lyxK

Gene Synonym(s)

lyxKK, ECK3569, b3580, JW3552, yiaP, sgbK, xylK, xyl, lyx[1][2][3], lyx

Product Desc.

LyxK[3]; L-xylulose kinase[2];

Component of L-xylulose kinase[3][2]

L-xylulose kinase; novel pathway for utilization of lyxKose via xylulose through rhamnose and pentose pathways; 3-keto-L-gulonate kinase; possibly involved in the utilization of L-dehydroascorbate (2,3-diketo-L-gulonate)[4]

Product Synonyms(s)

L-xylulose kinase[1], B3580[3][1], XylK[3][1], Xyl[3][1], Lyx[3][1], YiaP[3][1], SgbK[3][1], LyxK[3][1] , ECK3569, JW3552, lyx, xylK, yiaP, b3580

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yiaKLMNO-lyxKK-sgbHUE[3], yiaKLMNOPQRS

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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