ydbJ:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
touch QV table
touch
 
(3 intermediate revisions by the same user not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="W49b02c6b67c10"  class=" tableEdit New_Quickview_Table"   
{|  id="W49b02c6b67c10"  class=" tableEdit New_Quickview_Table"   


Line 33: Line 33:
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK1375, b4529, JW5215''<ref name='LIB:Riley_2006'/>
''ECK1375, b4529, JW5215''<ref name='LIB:Riley_2006'/>, JW5215''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 43: Line 43:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
predicted protein<ref name='LIB:Riley_2006'/>, YdbJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4529<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted protein<ref name='LIB:Riley_2006'/>, YdbJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4529<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1375, JW5215, b4529''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ydbJ&loc=MG1655:1439082..1439348,W3110:1442772..1443038,DH10B:1529677..1529943,REL606:1432664..1432930,BW2952:1331141..1331407 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1331141&end=1331407&gene=ydbJ&aa=mritiilvaparaenigaaaramktmgfsdlrivdsqahlepatrwvahgsgdiidnikvfptlaeslhdvdftvattarsrakyhyyatpvelvplleeksswmshaalvfgredsgltneelaladvltgvpmvadypslnlgqavmvycyqlatliqqpaksdatadqhqlqalreramtllttlavaddiklvdwlqqrlglleqrdtamlhrllhdieknitk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydbJ+AND+escherichia+coli Pubmed(ydbJ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=ydbJ Textpresso(ydbJ)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ydbJ&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G0-10450]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120016302&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ydbJ&loc=MG1655%3A1439082..1439348,W3110%3A1442772..1443038,DH10B%3A1529677..1529943,REL606%3A1432664..1432930,BW2952%3A1331141..1331407]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1331141&end=1331407&gene=ydbJ&aa=mritiilvaparaenigaaaramktmgfsdlrivdsqahlepatrwvahgsgdiidnikvfptlaeslhdvdftvattarsrakyhyyatpvelvplleeksswmshaalvfgredsgltneelaladvltgvpmvadypslnlgqavmvycyqlatliqqpaksdatadqhqlqalreramtllttlavaddiklvdwlqqrlglleqrdtamlhrllhdieknitk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ydbJ+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ydbJ]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:43, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ydbJ

Gene Synonym(s)

ECK1375, b4529, JW5215[1], JW5215

Product Desc.

predicted protein[2][3]

Probable lipoprotein, function unknown; Cys conserved[4]

Product Synonyms(s)

predicted protein[1], YdbJ[2][1], B4529[2][1] , ECK1375, JW5215, b4529

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ydbJ[2]

Regulation/Activity
Quick Links



        

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


First 16 aa are predicted to be a type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.