queA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
touch QV table
touch
 
(3 intermediate revisions by the same user not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="N49b02192f0f7e"  class=" tableEdit New_Quickview_Table"   
{|  id="N49b02192f0f7e"  class=" tableEdit New_Quickview_Table"   


Line 43: Line 43:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
S-adenosylmethionine:tRNA ribosyltransferase-isomerase<ref name='LIB:Riley_2006'/>, B0405<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TsaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, QueA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''S-adenosylmethionine:tRNA ribosyltransferase-isomerase<ref name='LIB:Riley_2006'/>, B0405<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TsaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, QueA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0399, JW0395, b0405''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=queA&loc=MG1655:424235..425305,W3110:424235..425305,DH10B:363566..364636,REL606:393434..394504,BW2952:326994..328064 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=326994&end=328064&gene=queA&aa=mrvtdfsfelpesliahypmpersscrllsldgptgalthgtftdlldklnpgdllvfnntrviparlfgrkasggkievlvermlddkrilahiraskapkpgaelllgddesinatmtarhgalfevefndersvldilnsighmplppyidrpdedadrelyqtvysekpgavaaptaglhfdeplleklrakgvemafvtlhvgagtfqpvrvdtiedhimhseyaevpqdvvdavlaakargnrviavgttsvrslesaaqaakndliepffddtqifiypgfqykvvdalvtnfhlpestlimlvsafagyqhtmnaykaaveekyrffsygdamfitynpqainervge Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=queA+AND+escherichia+coli Pubmed(queA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=queA Textpresso(queA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=queA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10812]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000803&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=queA&loc=MG1655%3A424235..425305,W3110%3A424235..425305,DH10B%3A363566..364636,REL606%3A393434..394504,BW2952%3A326994..328064]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=326994&end=328064&gene=queA&aa=mrvtdfsfelpesliahypmpersscrllsldgptgalthgtftdlldklnpgdllvfnntrviparlfgrkasggkievlvermlddkrilahiraskapkpgaelllgddesinatmtarhgalfevefndersvldilnsighmplppyidrpdedadrelyqtvysekpgavaaptaglhfdeplleklrakgvemafvtlhvgagtfqpvrvdtiedhimhseyaevpqdvvdavlaakargnrviavgttsvrslesaaqaakndliepffddtqifiypgfqykvvdalvtnfhlpestlimlvsafagyqhtmnaykaaveekyrffsygdamfitynpqainervge]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=queA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=queA]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:54, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

queA

Gene Synonym(s)

ECK0399, b0405, JW0395, tsaA[1]

Product Desc.

EG10812[2][3]

S-adenosylmethionine:tRNA ribosyltransferase-isomerase; queuosine biosynthesis,[4]

Product Synonyms(s)

S-adenosylmethionine:tRNA ribosyltransferase-isomerase[1], B0405[2][1], TsaA[2][1], QueA[2][1] , ECK0399, JW0395, b0405

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): queA[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Asn, Asp, Tyr, and His tRNA anticodons are modified. QueA converts 7-deazaguanine (preQ1-tRNA) to epoxyqueuosine (oQ-tRNA) in the penultimate step of Q-tRNA biosynthesis. The final step to make Q-tRNA from oQ-tRNA may be a cobamide-dependent reduction, but the gene is unknown (Frey, 1988). tgt mutants lack queuosine and are have reduced survival in stationary phase. (Noguchi, 1982).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=queA:Quickview&oldid=1398278"