ispD:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2742, b2747, JW2717, ygbP''<ref name='LIB:Riley_2006'/>
''ECK2742, b2747, JW2717, ygbP''<ref name='LIB:Riley_2006'/>, ygbP''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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4-diphosphocytidyl-2C-methyl-D-erythritol synthase<ref name='LIB:Riley_2006'/>, YgbP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2747<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''4-diphosphocytidyl-2C-methyl-D-erythritol synthase<ref name='LIB:Riley_2006'/>, YgbP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2747<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2742, JW2717, ygbP, b2747''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ispD&loc=MG1655:2870512..2869802,W3110:2871146..2870436,REL606:2767351..2766641,DH10B:2963054..2962344,BW2952:2755614..2756324 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2755614&end=2756324&gene=ispD&aa=matthldvcavvpaagfgrrmqtecpkqylsignqtilehsvhallahprvkrvviaispgdsrfaqlplanhpqitvvdggderadsvlaglkaagdaqwvlvhdaarpclhqddlarllalsetsrtggilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltralnegatitdeasaleycgfhpqlvegradnikvtrpedlalaefyltrtihqent Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ispD+AND+escherichia+coli Pubmed(ispD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=ispD Textpresso(ispD)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ispD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7423]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003988&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ispD&loc=MG1655%3A2870512..2869802,W3110%3A2871146..2870436,REL606%3A2767351..2766641,DH10B%3A2963054..2962344,BW2952%3A2755614..2756324]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2755614&end=2756324&gene=ispD&aa=matthldvcavvpaagfgrrmqtecpkqylsignqtilehsvhallahprvkrvviaispgdsrfaqlplanhpqitvvdggderadsvlaglkaagdaqwvlvhdaarpclhqddlarllalsetsrtggilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltralnegatitdeasaleycgfhpqlvegradnikvtrpedlalaefyltrtihqent]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ispD+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ispD]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ispD

Gene Synonym(s)

ECK2742, b2747, JW2717, ygbP[1], ygbP

Product Desc.

4-diphosphocytidyl-2C-methyl-D-erythritol synthetase[2][3];

Component of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase[3]

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; essential gene[4]

Product Synonyms(s)

4-diphosphocytidyl-2C-methyl-D-erythritol synthase[1], YgbP[2][1], IspD[2][1], B2747[2][1] , ECK2742, JW2717, ygbP, b2747

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ispDF[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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IspD is also called 4-diphosphocytidyl-2-C-methylerythritol synthase.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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