fryA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
Data loaded by TableEdit_Loader.
touch
 
(2 intermediate revisions by the same user not shown)
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="K46abdb4e954a9"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K46abdb4e954a9"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 102: Line 102:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="N46abdb51b13aa"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="N46abdb51b13aa"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 165: Line 165:
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
|
[http://pfam.janelia.org/family/PF00359 PF00359  Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2]
[http://pfam.janelia.org/family/PF00359 PF00359  Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2]
|
|
   
   
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF05524 PF05524  PEP-utilising enzyme, N-terminal]
|
|-
|
[[EcoCyc]]
|
EcoCyc:G7246
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG14151
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120003821
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB3903
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0007861
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 187: Line 229:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="N46a8200acb85e"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="N46a8200acb85e"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:34, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • YP_026278 (score: 0.216)
  • AT4G15530 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • YP_026278 (score: 0.223)
  • Q7XJK0 (score: 1.000; bootstrap: 100%)
  • Q7XJK1 (score: 1.000; bootstrap: 100%)
  • O24612 (score: 1.000; bootstrap: 100%)
  • Q6AVA8 (score: 1.000; bootstrap: 100%)
  • Q84N32 (score: 0.981)
  • Q9SNY6 (score: 0.973)
  • Q7DMU6 (score: 0.926)
  • P11155 (score: 0.904)
  • Q5RZZ9 (score: 0.862)
  • Q75KR1 (score: 0.776)
  • O82032 (score: 0.774)
  • Q7XYB5 (score: 0.214)
  • Q4JIY1 (score: 0.171)
  • Q7XJJ9 (score: 0.140)
  • Q41847 (score: 0.084)

From Inparanoid:20070104

Shigella flexneri

S2588

From SHIGELLACYC

E. coli O157

Z3648

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00391 PEP-utilising enzyme, mobile domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47831

Superfamily (EcoliWiki Page)

SUPERFAMILY:51621

Superfamily (EcoliWiki Page)

SUPERFAMILY:52009

Superfamily (EcoliWiki Page)

SUPERFAMILY:55594

Superfamily (EcoliWiki Page)

SUPERFAMILY:55804

Pfam (EcoliWiki Page)

PF02896 PEP-utilising enzyme, TIM barrel domain

Pfam (EcoliWiki Page)

PF00381 PTS HPr component phosphorylation site

Pfam (EcoliWiki Page)

PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2

Pfam (EcoliWiki Page)

PF05524 PEP-utilising enzyme, N-terminal

EcoCyc

EcoCyc:G7246

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14151

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003821

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3903

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007861

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=fryA:Evolution&oldid=1390675"