rluD:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00849 PF00849  RNA pseudouridylate synthase]
[http://pfam.janelia.org/family/PF00849 PF00849  RNA pseudouridylate synthase]
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[[EcoCyc]]
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EcoCyc:EG12098
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12098
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002003
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2022
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008532
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013169 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000031590 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G76050 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000204 (score: 1.000; bootstrap: 75%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038743 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019498 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007760 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040801-238 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-252 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0205216 (score: 1.000; bootstrap: 88%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008504 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5Z8P2 (score: 1.000; bootstrap: 99%)
  • Q8SB33 (score: 0.485)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000007605 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDL036C (score: 1.000; bootstrap: 100%)
  • YOL066C (score: 1.000; bootstrap: 100%)
  • YGR169C (score: 0.121)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000026859 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

SFHB

From SHIGELLACYC

E. coli O157

SFHB

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01479 S4 domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:55120

Superfamily (EcoliWiki Page)

SUPERFAMILY:55174

Pfam (EcoliWiki Page)

PF00849 RNA pseudouridylate synthase

EcoCyc

EcoCyc:EG12098

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12098

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002003

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2022

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008532

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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