nirB:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
Data loaded by TableEdit_Loader.
touch
 
(3 intermediate revisions by the same user not shown)
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="J46abff218254b"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="J46abff218254b"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 128: Line 128:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="U46abff2c37536"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="U46abff2c37536"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 136: Line 136:
|
|
[http://pfam.janelia.org/family/PF00070 PF00070  Pyridine nucleotide-disulphide oxidoreductase]
[http://pfam.janelia.org/family/PF00070 PF00070  Pyridine nucleotide-disulphide oxidoreductase]
|
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF01077 PF01077  Nitrite and sulphite reductase 4Fe-4S domain]
|
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF03460 PF03460  Nitrite/Sulfite reductase ferredoxin-like half domain]
|
|
   
   
Line 170: Line 184:
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
|
[http://pfam.janelia.org/family/PF01077 PF01077 Nitrite and sulphite reductase 4Fe-4S domain]
[http://pfam.janelia.org/family/PF07992 PF07992 Pyridine nucleotide-disulphide oxidoreductase]
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:EG10653
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG10653
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120000646
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB0647
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0011003
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 192: Line 241:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="T46a83ec6c8a7a"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T46a83ec6c8a7a"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000001550 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000020649 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000346616 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008433 (score: 1.000; bootstrap: 59%)

From Inparanoid:20070104

Mus musculus

  • MGI:1918611 (score: 1.000; bootstrap: 57%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000004475 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000033692 (score: 1.000; bootstrap: 69%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003848001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

NIRB

From SHIGELLACYC

E. coli O157

NIRB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00070 Pyridine nucleotide-disulphide oxidoreductase

Pfam (EcoliWiki Page)

PF01077 Nitrite and sulphite reductase 4Fe-4S domain

Pfam (EcoliWiki Page)

PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain

Pfam (EcoliWiki Page)

PF04324 BFD-like [2Fe-2S binding domain]

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Superfamily (EcoliWiki Page)

SUPERFAMILY:56014

Pfam (EcoliWiki Page)

PF07992 Pyridine nucleotide-disulphide oxidoreductase

EcoCyc

EcoCyc:EG10653

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10653

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000646

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0647

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011003

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=nirB:Evolution&oldid=1391437"