mug:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
Data loaded by TableEdit_Loader.
touch
 
(One intermediate revision by the same user not shown)
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="N46abf2cd7af72"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="N46abf2cd7af72"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 189: Line 189:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="U46abf2e73f1ef"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="U46abf2e73f1ef"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF03167 PF03167  Uracil DNA glycosylase superfamily]
|
|-  
|-  
|
|
Line 208: Line 215:
|-  
|-  
|
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
|
|
[http://pfam.janelia.org/family/PF03167 PF03167 Uracil DNA glycosylase superfamily]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF03167 PFAM:PF03167]
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:EG12717
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG12717
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120002372
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB2576
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0010073
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 232: Line 274:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="T46a833bfef70b"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T46a833bfef70b"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:35, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000003998 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000028828 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000011067 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000000109 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050522-44 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050522-44 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0026869 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15170-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020740 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000266775 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000028034 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000002685 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:108247 (score: 1.000; bootstrap: 100%)
  • MGI:3645587 (score: 0.982)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000009130 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000037966 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000045432 (score: 0.592)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC9655c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000179494 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000148776 (score: 0.287)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00004540001 (score: 1.000; bootstrap: 100%)
  • GSTENP00004541001 (score: 0.198)

From Inparanoid:20070104

E. coli O157

YGJF

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03167 Uracil DNA glycosylase superfamily

Superfamily (EcoliWiki Page)

SUPERFAMILY:52141

Panther (EcoliWiki Page)

PTHR12159:SF7

PFAM (EcoliWiki Page)

PFAM:PF03167

EcoCyc

EcoCyc:EG12717

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12717

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002372

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2576

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010073

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=mug:Evolution&oldid=1391193"