ugd:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00984 PF00984  UDP-glucose/GDP-mannose dehydrogenase family, central domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03720 PF03720  UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03721 PF03721  UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain]
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[[EcoCyc]]
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EcoCyc:G7091
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13407
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003677
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3183
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006734
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014609 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000002547 (score: 0.067)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000019302 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000023536 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-011022-1 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0010851 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000023101 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000015364 (score: 0.202)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000319501 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000002518 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000025708 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1306785 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q40728 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000027531 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000003691 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000142425 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00010193001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000033379 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000028075 (score: 0.122)
  • ENSXETP00000036025 (score: 0.098)

From Inparanoid:20070104

E. coli O157

UGD

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:48179

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Superfamily (EcoliWiki Page)

SUPERFAMILY:52413

Panther (EcoliWiki Page)

PTHR11374:SF18

Pfam (EcoliWiki Page)

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain

Pfam (EcoliWiki Page)

PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

Pfam (EcoliWiki Page)

PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

EcoCyc

EcoCyc:G7091

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13407

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003677

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3183

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006734

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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