tag:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03352 PF03352  Methyladenine glycosylase]
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[[EcoCyc]]
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EcoCyc:EG10986
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10986
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000975
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0979
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011593
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G44680 (score: 1.000; bootstrap: 100%)
  • AT3G12710 (score: 0.255)
  • AT1G13635 (score: 0.099)
  • AT5G57970 (score: 0.090)
  • AT1G15970 (score: 0.083)
  • AT1G80850 (score: 0.073)
  • AT1G75090 (score: 0.072)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0232992 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q67UR6 (score: 1.000; bootstrap: 100%)
  • Q6ERQ1 (score: 0.245)
  • Q7XT71 (score: 0.230)
  • Q5VQI7 (score: 0.119)
  • Q6ZBQ9 (score: 0.098)

From Inparanoid:20070104

Shigella flexneri

TAG

From SHIGELLACYC

E. coli O157

TAG

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03352 Methyladenine glycosylase

Superfamily (EcoliWiki Page)

SUPERFAMILY:48150

EcoCyc

EcoCyc:EG10986

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10986

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000975

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0979

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011593

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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