rluA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
deleting Pfam from accessions table on evolution pages
touch
 
(2 intermediate revisions by the same user not shown)
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="F46ab977e287f0"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F46ab977e287f0"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 178: Line 178:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="N46ab9792d273a"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="N46ab9792d273a"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 188: Line 188:
|
|
   
   
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF00849 PF00849  RNA pseudouridylate synthase]
|
|-
|
[[EcoCyc]]
|
EcoCyc:EG12609
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG12609
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120002331
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB2493
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0000196
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 207: Line 249:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="W46a7e7da418aa"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="W46a7e7da418aa"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:29, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013169 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G56345 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000204 (score: 1.000; bootstrap: 75%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038743 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000029009 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007760 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040801-238 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-252 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216904 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008504 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000007264 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000021069 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Mus musculus

  • MGI:1919186 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000007605 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000015206 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000133004 (score: 1.000; bootstrap: 87%)

From Inparanoid:20070104

Shigella flexneri

YABO

From SHIGELLACYC

E. coli O157

YABO

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:55120

Pfam (EcoliWiki Page)

PF00849 RNA pseudouridylate synthase

EcoCyc

EcoCyc:EG12609

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12609

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002331

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2493

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000196

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=rluA:Evolution&oldid=1388856"