fryA:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00391 PF00391  PEP-utilising enzyme, mobile domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02896 PF02896  PEP-utilising enzyme, TIM barrel domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00381 PF00381  PTS HPr component phosphorylation site]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00359 PF00359  Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF05524 PF05524  PEP-utilising enzyme, N-terminal]
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[[EcoCyc]]
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EcoCyc:G7246
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG14151
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003821
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3903
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0007861
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • YP_026278 (score: 0.216)
  • AT4G15530 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • YP_026278 (score: 0.223)
  • Q7XJK0 (score: 1.000; bootstrap: 100%)
  • Q7XJK1 (score: 1.000; bootstrap: 100%)
  • O24612 (score: 1.000; bootstrap: 100%)
  • Q6AVA8 (score: 1.000; bootstrap: 100%)
  • Q84N32 (score: 0.981)
  • Q9SNY6 (score: 0.973)
  • Q7DMU6 (score: 0.926)
  • P11155 (score: 0.904)
  • Q5RZZ9 (score: 0.862)
  • Q75KR1 (score: 0.776)
  • O82032 (score: 0.774)
  • Q7XYB5 (score: 0.214)
  • Q4JIY1 (score: 0.171)
  • Q7XJJ9 (score: 0.140)
  • Q41847 (score: 0.084)

From Inparanoid:20070104

Shigella flexneri

S2588

From SHIGELLACYC

E. coli O157

Z3648

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00391 PEP-utilising enzyme, mobile domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47831

Superfamily (EcoliWiki Page)

SUPERFAMILY:51621

Superfamily (EcoliWiki Page)

SUPERFAMILY:52009

Superfamily (EcoliWiki Page)

SUPERFAMILY:55594

Superfamily (EcoliWiki Page)

SUPERFAMILY:55804

Pfam (EcoliWiki Page)

PF02896 PEP-utilising enzyme, TIM barrel domain

Pfam (EcoliWiki Page)

PF00381 PTS HPr component phosphorylation site

Pfam (EcoliWiki Page)

PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2

Pfam (EcoliWiki Page)

PF05524 PEP-utilising enzyme, N-terminal

EcoCyc

EcoCyc:G7246

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14151

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003821

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3903

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007861

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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