dusC:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01207 PF01207  Dihydrouridine synthase (Dus)]
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[[EcoCyc]]
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EcoCyc:EG12022
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12022
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001939
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1957
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0007074
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000609 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00041459 (score: 1.000; bootstrap: 100%)
  • WBGene00033329 (score: 0.050)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00016674 (score: 1.000; bootstrap: 83%)
  • WBGene00009452 (score: 0.055)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000005834 (score: 1.000; bootstrap: 66%)
  • ENSCAFP00000008929 (score: 0.108)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000003786 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000015347 (score: 0.124)
  • ENSCINP00000014945 (score: 0.119)

From Inparanoid:20070104

Danio rerio

  • ZDB-CDNA-040801-247 (score: 1.000; bootstrap: 100%)
  • ZDB-GENE-040801-233 (score: 0.998)
  • ZDB-CDNA-040425-1158 (score: 0.127)
  • ZDB-GENE-030131-1435 (score: 0.127)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000020448 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000004101 (score: 0.099)
  • ENSMODP00000006529 (score: 0.052)

From Inparanoid:20070104

Mus musculus

  • MGI:1919166 (score: 1.000; bootstrap: 78%)
  • MGI:1915980 (score: 0.114)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011068 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YOHI

From SHIGELLACYC

E. coli O157

YOHI

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01207 Dihydrouridine synthase (Dus)

Superfamily (EcoliWiki Page)

SUPERFAMILY:51395

EcoCyc

EcoCyc:EG12022

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12022

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001939

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1957

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007074

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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