ampH:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00144 PF00144  Beta-lactamase]
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[[EcoCyc]]
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EcoCyc:EG12867
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12867
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002410
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2708
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0001292
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:30, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Caenorhabditis briggsae

  • WBGene00040947 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013949 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0206504 (score: 1.000; bootstrap: 57%)
  • DDB0168304 (score: 0.389)
  • DDB0204835 (score: 0.329)
  • DDB0204836 (score: 0.308)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000005534 (score: 1.000; bootstrap: 45%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000013893 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2448566 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000168835 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00008482001 (score: 1.000; bootstrap: 100%)
  • GSTENP00022944001 (score: 0.598)

From Inparanoid:20070104

Shigella flexneri

YAIH

From SHIGELLACYC

E. coli O157

YAIH

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00144 Beta-lactamase

Panther (EcoliWiki Page)

PTHR22935:SF32

Superfamily (EcoliWiki Page)

SUPERFAMILY:56601

EcoCyc

EcoCyc:EG12867

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12867

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002410

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2708

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001292

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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