agp:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00328 PF00328  Histidine acid phosphatase]
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[[EcoCyc]]
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EcoCyc:EG10033
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10033
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000030
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0032
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003388
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020951 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000014917 (score: 0.164)
  • ENSANGP00000018380 (score: 0.143)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000004322 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000012985 (score: 0.325)
  • ENSCAFP00000009365 (score: 0.269)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000270593 (score: 1.000; bootstrap: 100%)
  • ENSP00000256997 (score: 0.328)
  • ENSP00000323036 (score: 0.302)
  • ENSP00000294912 (score: 0.058)

From Inparanoid:20070104

Mus musculus

  • MGI:3644563 (score: 1.000; bootstrap: 100%)
  • MGI:87882 (score: 0.333)
  • MGI:1928480 (score: 0.285)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000038370 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000018620 (score: 0.339)
  • ENSRNOP00000016222 (score: 0.296)
  • ENSRNOP00000044125 (score: 0.053)

From Inparanoid:20070104

Shigella flexneri

AGP

From SHIGELLACYC

E. coli O157

AGP

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00328 Histidine acid phosphatase

Superfamily (EcoliWiki Page)

SUPERFAMILY:53254

EcoCyc

EcoCyc:EG10033

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10033

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000030

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0032

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003388

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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