rpsI:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00380 PFAM:PF00380]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54211 SUPERFAMILY:54211]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54211 SUPERFAMILY:54211]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21569:SF0 PTHR21569:SF0]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21569:SF0 PTHR21569:SF0]
[http://pfam.janelia.org/family/PF00380 PF00380  Ribosomal protein S9/S16]
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[[EcoCyc]]
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EcoCyc:EG10908
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10908
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000899
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0901
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010597
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000014497 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000002112 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G49080 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008093 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032692 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004485 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000003111 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000005809 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191671 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0037529 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15542-PA (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027063 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000258455 (score: 1.000; bootstrap: 75%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000025861 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003013 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Mus musculus

  • MGI:1916777 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Oryza gramene

  • Q7XAM9 (score: 1.000; bootstrap: 73%)
  • Q7XAN0 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000021085 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021899 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR146W (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC29A43c (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000182212 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00023770001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000005503 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Shigella flexneri

RPSI

From SHIGELLACYC

E. coli O157

RPSI

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

Panther (EcoliWiki Page)

PTHR21569:SF0

Pfam (EcoliWiki Page)

PF00380 Ribosomal protein S9/S16

EcoCyc

EcoCyc:EG10908

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10908

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000899

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0901

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010597

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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