yeaD:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01263 PFAM:PF01263]
[http://pfam.janelia.org/family/PF01263 PF01263 Aldose 1-epimerase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=74650 SUPERFAMILY:74650]
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[[EcoCyc]]
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EcoCyc:G6966
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12679
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003553
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2544
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0005923
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000005193 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G23730 (score: 1.000; bootstrap: 100%)
  • AT5G57330 (score: 1.000; bootstrap: 100%)
  • AT3G61610 (score: 0.610)
  • AT4G25900 (score: 0.527)
  • AT3G01590 (score: 0.525)
  • AT5G14500 (score: 0.521)
  • AT5G66530 (score: 0.068)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218007 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027905 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21473-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5SMZ1 (score: 1.000; bootstrap: 100%)
  • Q6Z3M0 (score: 0.592)
  • Q7XSR8 (score: 0.586)
  • Q8S3Q3 (score: 0.580)
  • Q40784 (score: 0.580)
  • Q6ETP0 (score: 0.422)
  • Q6AUN2 (score: 0.304)
  • Q6K2P3 (score: 0.062)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR099C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YEAD

From SHIGELLACYC

E. coli O157

YEAD

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01263 Aldose 1-epimerase

Panther (EcoliWiki Page)

PTHR11122:SF9

Superfamily (EcoliWiki Page)

SUPERFAMILY:74650

EcoCyc

EcoCyc:G6966

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12679

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003553

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2544

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0005923

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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