rssA:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01734 PFAM:PF01734]
[http://pfam.janelia.org/family/PF01734 PF01734 Patatin-like phospholipase]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14226:SF8 PTHR14226:SF8]
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[[EcoCyc]]
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EcoCyc:EG12120
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12120
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002023
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2041
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0004144
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020064 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000023855 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000032562 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000007351 (score: 0.299)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00029118 (score: 1.000; bootstrap: 100%)
  • WBGene00024017 (score: 0.255)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010915 (score: 1.000; bootstrap: 100%)
  • WBGene00022718 (score: 0.318)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000028715 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000026996 (score: 0.589)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013452 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050309-66 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0003656 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15305-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000014200 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000012785 (score: 0.522)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000221249 (score: 1.000; bootstrap: 100%)
  • ENSP00000277531 (score: 0.568)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000018839 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000021410 (score: 0.544)

From Inparanoid:20070104

Mus musculus

  • MGI:1354723 (score: 1.000; bootstrap: 100%)
  • MGI:2385325 (score: 0.566)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000011633 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000001298 (score: 0.563)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YML059C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC4B34c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000135019 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000155782 (score: 0.343)
  • NEWSINFRUP00000176434 (score: 0.075)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00020014001 (score: 1.000; bootstrap: 100%)
  • GSTENP00004105001 (score: 0.435)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000028514 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000008580 (score: 0.441)

From Inparanoid:20070104

Shigella flexneri

YCHK

From SHIGELLACYC

E. coli O157

YCHK

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01734 Patatin-like phospholipase

Superfamily (EcoliWiki Page)

SUPERFAMILY:52151

Panther (EcoliWiki Page)

PTHR14226:SF8

EcoCyc

EcoCyc:EG12120

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12120

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002023

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2041

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004144

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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