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{{Tab On|Quickview|ebgA}}{{Tab|Gene|ebgA}}{{Tab|Gene Product(s)|ebgA}}{{Tab|Expression|ebgA}}{{Tab|Evolution|ebgA}}{{Tab|On One Page|ebgA}}{{TabsBottom}}
{{Tab On|Quickview|ebgA}}{{Tab|Gene|ebgA}}{{Tab|Gene Product(s)|ebgA}}{{Tab|Expression|ebgA}}{{Tab|Evolution|ebgA}}{{Tab|On One Page|ebgA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ebgA:Gene|''ebgA]]'' (synonyms: ''ECK3066, b3076, JW5511'')<ref name='LIB:Riley_2006'/>
''ebgA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ebgA:Gene_Product(s)|EbgA product]]<ref name='LIB:Riley_2006'/>: cryptic beta-D-galactosidase, alpha subunit<ref name='LIB:Riley_2006'/>, B3076<ref name='LIB:EcoCyc10.6'/>, EbgA<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:evolved &beta;-D-galactosidase|evolved &beta;-D-galactosidase]]<ref name='LIB:EcoCyc11.1'/>
''ECK3066, b3076, JW5511''<ref name='LIB:Riley_2006'/>, JW5511''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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evolved &beta;-D-galactosidase, &alpha; subunit; cryptic gene<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
evolved &beta;-D-galactosidase, &alpha; subunit; cryptic gene<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:evolved &beta;-D-galactosidase|evolved &beta;-D-galactosidase]]<ref name='LIB:EcoCyc11.1'/>


Evolved beta-galactosidase, alpha subunit; normal substrate and function unknown; alpha(4)beta(4) holoenzyme<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''cryptic beta-D-galactosidase, alpha subunit<ref name='LIB:Riley_2006'/>, B3076<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EbgA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3066, JW5511, b3076''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ebgAC|ebgAC]]<ref name='LIB:EcoCyc10.6'/>, OP00170  
transcription unit(s): [[:Category:Txn_unit:ebgAC|ebgAC]]<ref name='LIB:EcoCyc10.6'/>, OP00170  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ebgA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10252]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000246&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ebgA&loc=MG1655%3A3220655..3223747,W3110%3A3221289..3224381,REL606%3A3155450..3158542,DH10B%3A3318400..3321492,BW2952%3A3107803..3110895]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3107803&end=3110895&gene=ebgA&aa=mnrweniqlthenrlaprayffsydsvaqartfaretsslflplsgqwnfhffdhplqvpeaftselmadwghitvpamwqmeghgklqytdegfpfpidvpfvpsdnptgayqriftlsdgwqgkqtlikfdgvetyfevyvngqyvgfskgsrltaefdisamvktgdnllcvrvmqwadstyvedqdmwwsagifrdvylvgkhlthindftvrtdfdeaycdatlscevvlenlaaspvvttleytlfdgervvhssaidhlaiekltsasfaftveqpqqwsaespylyhlvmtlkdangnvlevvpqrvgfrdikvrdglfwinnryvmlhgvnrhdndhrkgravgmdrvekdlqlmkqhninsvrtahypndprfyelcdiyglfvmaetdveshgfanvgdisritddpqwekvyverivrhihaqknhpsiiiwslgnesgygcniramyhaakalddtrlvhyeedrdaevvdiistmytrvplmnefgeyphpkpriiceyahamgngpgglteyqnvfykhdciqghyvwewcdhgiqaqddhgnvwykfggdygdypnnynfcldgliysdqtpgpglkeykqviapvkihardltrgelkvenklwfttlddytlhaevraegetlatqqiklrdvapnseaplqitlpqldareaflnitvtkdsrtryseaghpiatyqfplkentaqpvpfapnnarpltleddrlsctvrgynfaitfskmsgkptswqvngeslltrepkinffkpmidnhkqeyeglwqpnhlqimqehlrdfaveqsdgevliisrtviappvfdfgmrctyiwriaadgqvnvalsgerygdyphiipcigftmgingeydqvayygrgpgenyadsqqaniidiwrstvdamfenypfpqnngnrqhvrwtaltnrhgngllvvpqrpinfsawhytqenihaaqhcnelqrsdditlnldhqllglgsnswgsevldswrvwfrdfsygftllpvsggeataqslasyefgagffstnlhsenkq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ebgA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ebgA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
Wildtype EbgA can be mutated to hydrolyze lactose. EbgA has an Ig-like domain: pfam PF00703 aligns to residues 209-318. ebgA, uidA and lacZ are paralogs.<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ebgA

Gene Synonym(s)

ECK3066, b3076, JW5511[1], JW5511

Product Desc.

evolved β-D-galactosidase, α subunit; cryptic gene[2][3];

Component of evolved β-D-galactosidase[3]

Evolved beta-galactosidase, alpha subunit; normal substrate and function unknown; alpha(4)beta(4) holoenzyme[4]

Product Synonyms(s)

cryptic beta-D-galactosidase, alpha subunit[1], B3076[2][1], EbgA[2][1] , ECK3066, JW5511, b3076

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ebgAC[2], OP00170

Regulation/Activity
Quick Links



        

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Notes

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Wildtype EbgA can be mutated to hydrolyze lactose. EbgA has an Ig-like domain: pfam PF00703 aligns to residues 209-318. ebgA, uidA and lacZ are paralogs.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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