mdtF:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php
touch
 
(4 intermediate revisions by the same user not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="T49aeec27ec9d2"  class=" tableEdit New_Quickview_Table"   
{|  id="T49aeec27ec9d2"  class=" tableEdit New_Quickview_Table"   


Line 33: Line 33:
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK3498, b3514, JW3482, yhiV''<ref name='LIB:Riley_2006'/>
''ECK3498, b3514, JW3482, yhiV''<ref name='LIB:Riley_2006'/>, yhiV''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 45: Line 45:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
multidrug transporter, RpoS-dependent<ref name='LIB:Riley_2006'/>, B3514<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MdtF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''multidrug transporter, RpoS-dependent<ref name='LIB:Riley_2006'/>, B3514<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MdtF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhiV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3498, JW3482, yhiV, b3514''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 65: Line 65:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=mdtF&loc=MG1655:3658437..3661550,W3110:3980001..3976888,DH10B:3756182..3759295,REL606:3589905..3593018 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3589905&end=3593018&gene=mdtF&aa=manyfidrpvfawvlaiimmlagglaimnlpvaqypqiapptitvsatypgadaqtvedsvtqvieqnmngldglmymsstsdaagnasitltfetgtspdiaqvqvqnklqlampslpeavqqqgisvdksssnilmvaafisdngslnqydiadyvasnikdplsrtagvgsvqlfgseyamriwldpqklnkynlvpsdvisqikvqnnqisggqlggmpqaadqqlnasiivqtrlqtpeefgkillkvqqdgsqvllrdvarvelgaedystvaryngkpaagiaiklaaganaldtsravkeelnrlsayfpaslktvypydttpfieisiqevfktlveaiilvflvmylflqnfratiiptiavpvvilgtfailsavgftintltmfgmvlaigllvddaivvvenverviaedklppkeathksmgqiqralvgiavvlsavfmpmafmsgatgeiyrqfsitlissmllsvfvamsltpalcatilkaapegghkpnalfarfntlfekstqhytdstrsllrctgrymvvyllicagmavlflrtptsflpeedqgvfmttaqlpsgatmvnttkvlqqvtdyyltkekdnvqsvftvggfgfsgqgqnnglafislkpwservgeensvtaiiqramialssinkavvfpfnlpavaelgtasgfdmelldngnlghekltqarnellslaaqspnqvtgvrpngledtpmfkvnvnaakaeamgvalsdinqtistafgssyvndflnqgrvkkvyvqagtpfrmlpdninqwyvrnasgtmaplsaysstewtygsprleryngipsmeilgeaaagkstgdamkfmadlvaklpagvgyswtglsyqealssnqapalyaislvvvflalaalyeswsipfsvmlvvplgvvgallatdlrglsndvyfqvgllttiglsaknailivefavemmqkegktpieaiieaarmrlrpilmtslafilgvlplvishgagsgaqnavgtgvmggmfaatvlaiyfvpvffvvvehlfarfkka Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mdtF+AND+escherichia+coli Pubmed(mdtF)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=mdtF Textpresso(mdtF)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=mdtF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12241]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002124&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=mdtF&loc=MG1655%3A3658437..3661550,W3110%3A3980001..3976888,DH10B%3A3756182..3759295,REL606%3A3589905..3593018,BW2952%3A3546931..3550044]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3546931&end=3550044&gene=mdtF&aa=manyfidrpvfawvlaiimmlagglaimnlpvaqypqiapptitvsatypgadaqtvedsvtqvieqnmngldglmymsstsdaagnasitltfetgtspdiaqvqvqnklqlampslpeavqqqgisvdksssnilmvaafisdngslnqydiadyvasnikdplsrtagvgsvqlfgseyamriwldpqklnkynlvpsdvisqikvqnnqisggqlggmpqaadqqlnasiivqtrlqtpeefgkillkvqqdgsqvllrdvarvelgaedystvaryngkpaagiaiklaaganaldtsravkeelnrlsayfpaslktvypydttpfieisiqevfktlveaiilvflvmylflqnfratiiptiavpvvilgtfailsavgftintltmfgmvlaigllvddaivvvenverviaedklppkeathksmgqiqralvgiavvlsavfmpmafmsgatgeiyrqfsitlissmllsvfvamsltpalcatilkaapegghkpnalfarfntlfekstqhytdstrsllrctgrymvvyllicagmavlflrtptsflpeedqgvfmttaqlpsgatmvnttkvlqqvtdyyltkekdnvqsvftvggfgfsgqgqnnglafislkpwservgeensvtaiiqramialssinkavvfpfnlpavaelgtasgfdmelldngnlghekltqarnellslaaqspnqvtgvrpngledtpmfkvnvnaakaeamgvalsdinqtistafgssyvndflnqgrvkkvyvqagtpfrmlpdninqwyvrnasgtmaplsaysstewtygsprleryngipsmeilgeaaagkstgdamkfmadlvaklpagvgyswtglsyqealssnqapalyaislvvvflalaalyeswsipfsvmlvvplgvvgallatdlrglsndvyfqvgllttiglsaknailivefavemmqkegktpieaiieaarmrlrpilmtslafilgvlplvishgagsgaqnavgtgvmggmfaatvlaiyfvpvffvvvehlfarfkka]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mdtF+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=mdtF]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:48, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

mdtF

Gene Synonym(s)

ECK3498, b3514, JW3482, yhiV[1], yhiV

Product Desc.

MdtF[2][3];

Component of MdtEF multidrug transporter[2]; MdtEF-Tolc Multidrug Efflux Transport System[3]

MdtEF-TolC multidrug resistance efflux RND-type transporter; overexpression resistance to erythromycin, deoxycholate, octane and rhodamine; no mutant phenoype[4]

Product Synonyms(s)

multidrug transporter, RpoS-dependent[1], B3514[2][1], MdtF[2][1], YhiV[2][1] , ECK3498, JW3482, yhiV, b3514

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): mdtE[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


EvgAS regulon. HT_Cmplx27_Mem: AcrB+MdtF. N-acetyl-D-glucosamine inducible, via Crp (Hirakawa, 2006). Crp represses mdtEF (Nishino, 2008).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=mdtF:Quickview&oldid=1396521"