csgC:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1029, b1043, JW1026, ycdE''<ref name='LIB:Riley_2006'/>
''ECK1029, b1043, JW1026, ycdE''<ref name='LIB:Riley_2006'/>, agfC, ycdE''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted curli production protein<ref name='LIB:Riley_2006'/>, B1043<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcdE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CsgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted curli production protein<ref name='LIB:Riley_2006'/>, B1043<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcdE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CsgC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , agfC, ECK1029, JW1026, ycdE, b1043''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=csgC&loc=MG1655:1104184..1104516,W3110:1105202..1105534,DH10B:1159629..1159961,REL606:1119530..1119862 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1119530&end=1119862&gene=csgC&aa=mntllllaalssqitfnttqqgdvytiipevtltqsclcrvqilslregssgqsqtkqektlslpanqpialtklslnispddrvkivvtvsdgqslhlsqqwppsseks Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=csgC+AND+escherichia+coli Pubmed(csgC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=csgC Textpresso(csgC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=csgC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6548]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003144&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=csgC&loc=MG1655%3A1104184..1104516,W3110%3A1105202..1105534,DH10B%3A1159629..1159961,REL606%3A1119530..1119862,BW2952%3A1008109..1008441]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1008109&end=1008441&gene=csgC&aa=mntllllaalssqitfnttqqgdvytiipevtltqsclcrvqilslregssgqsqtkqektlslpanqpialtklslnispddrvkivvtvsdgqslhlsqqwppsseks]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=csgC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=csgC]]&nbsp;&nbsp;


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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

csgC

Gene Synonym(s)

ECK1029, b1043, JW1026, ycdE[1], agfC, ycdE

Product Desc.

putative curli production protein[2][3]

Possible secretion or assembly protein for bacterial fibers[4]

Product Synonyms(s)

predicted curli production protein[1], B1043[2][1], YcdE[2][1], CsgC[2][1] , agfC, ECK1029, JW1026, ycdE, b1043

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): csgBAC[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Potential periplasmic protein: signal peptide of 17 or 22 aa weakly predicted.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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