speA:Quickview: Difference between revisions

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{{Tab On|Quickview|speA}}{{Tab|Gene|speA}}{{Tab|Gene Product(s)|speA}}{{Tab|Expression|speA}}{{Tab|Evolution|speA}}{{Tab|On One Page|speA}}{{TabsBottom}}
{{Tab On|Quickview|speA}}{{Tab|Gene|speA}}{{Tab|Gene Product(s)|speA}}{{Tab|Expression|speA}}{{Tab|Evolution|speA}}{{Tab|On One Page|speA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[speA:Gene|''speA]]'' (synonyms: ''ECK2933, b2938, JW2905'')<ref name='LIB:Riley_2006'/>
''speA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[speA:Gene_Product(s)|SpeA product]]<ref name='LIB:Riley_2006'/>: biosynthetic arginine decarboxylase, PLP-binding<ref name='LIB:Riley_2006'/>, B2938<ref name='LIB:EcoCyc10.6'/>, SpeA<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:arginine decarboxylase, biosynthetic|arginine decarboxylase, biosynthetic]]<ref name='LIB:EcoCyc10.6'/>
''ECK2933, b2938, JW2905''<ref name='LIB:Riley_2006'/>, JW2905''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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SpeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
SpeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:arginine decarboxylase, biosynthetic|arginine decarboxylase, biosynthetic]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Biosynthetic decarboxylase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''biosynthetic arginine decarboxylase, PLP-binding<ref name='LIB:Riley_2006'/>, B2938<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SpeA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2933, JW2905, b2938''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:speAB|speAB]]<ref name='LIB:EcoCyc10.6'/>, OP00287  
transcription unit(s): [[:Category:Txn_unit:speAB|speAB]]<ref name='LIB:EcoCyc10.6'/>, OP00287  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=speA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10959]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000948&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=speA&loc=MG1655%3A3083933..3081957,W3110%3A3084567..3082591,DH10B%3A3179002..3177026,REL606%3A2971662..2969686,BW2952%3A2969105..2971081]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2969105&end=2971081&gene=speA&aa=msddmsmglpssagehgvlrsmqevamssqeaskmlrtyniawwgnnyydvnelghisvcpdpdvpearvdlaqlvktreaqgqrlpalfcfpqilqhrlrsinaafkraresygyngdyflvypikvnqhrrvieslihsgeplgleagskaelmavlahagmtrsvivcngykdreyirlaligekmghkvylviekmseiaivldeaerlnvvprlgvrarlasqgsgkwqssggekskfglaatqvlqlvetlreagrldslqllhfhlgsqmanirdiatgvresarfyvelhklgvniqcfdvggglgvdyegtrsqsdcsvnyglneyanniiwaigdaceenglphptvitesgravtahhtvlvsniigverneytvptapaedapralqsmwetwqemhepgtrrslrewlhdsqmdlhdihigyssgifslqerawaeqlylsmchevqkqldpqnrahrpiidelqermadkmyvnfslfqsmpdawgidqlfpvlplegldqvperravllditcdsdgaidhyidgdgiattmpmpeydpenppmlgffmvgayqeilgnmhnlfgdteavdvfvfpdgsvevelsdegdtvadmlqyvqldpktlltqfrdqvkktdldaelqqqfleefeaglygytylede]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=speA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=speA]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

speA

Gene Synonym(s)

ECK2933, b2938, JW2905[1], JW2905

Product Desc.

SpeA[2][3];

Component of arginine decarboxylase, biosynthetic[2][3]

Biosynthetic decarboxylase[4]

Product Synonyms(s)

biosynthetic arginine decarboxylase, PLP-binding[1], B2938[2][1], SpeA[2][1] , ECK2933, JW2905, b2938

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): speAB[2], OP00287

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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