yrdA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3266, b3279, JW5710''<ref name='LIB:Riley_2006'/>
''ECK3266, b3279, JW5710''<ref name='LIB:Riley_2006'/>, JW5710''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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conserved protein<ref name='LIB:Riley_2006'/>, B3279<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''conserved protein<ref name='LIB:Riley_2006'/>, B3279<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3266, JW5710, b3279''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yrdA&loc=MG1655:3427258..3427812,W3110:4211180..4210626,REL606:3357141..3357695,DH10B:3525003..3525557 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3525003&end=3525557&gene=yrdA&aa=mkcftlssqrrriigipifctsifliffsvccfftlfaaiahktvlfcilkdlhkannapkvisksfiaevsmsdvlrpyrdlfpqigqrvmiddssvvigdvrladdvgiwplvvirgdvhyvqigartniqdgsmlhvthkssynpdgnpltigedvtvghkvmlhgctignrvlvgmgsilldgaiveddvmigagslvpqnkrlesgylylgspvkqirplsdeekaglrysannyvkwkdeyldqgnqtqp Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yrdA+AND+escherichia+coli Pubmed(yrdA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=yrdA Textpresso(yrdA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yrdA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7696]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004242&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yrdA&loc=MG1655%3A3427258..3427812,W3110%3A4211180..4210626,REL606%3A3357141..3357695,DH10B%3A3525003..3525557,BW2952%3A3314415..3314969]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3314415&end=3314969&gene=yrdA&aa=mkcftlssqrrriigipifctsifliffsvccfftlfaaiahktvlfcilkdlhkannapkvisksfiaevsmsdvlrpyrdlfpqigqrvmiddssvvigdvrladdvgiwplvvirgdvhyvqigartniqdgsmlhvthkssynpdgnpltigedvtvghkvmlhgctignrvlvgmgsilldgaiveddvmigagslvpqnkrlesgylylgspvkqirplsdeekaglrysannyvkwkdeyldqgnqtqp]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yrdA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yrdA]]&nbsp;&nbsp;


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Latest revision as of 21:39, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yrdA

Gene Synonym(s)

ECK3266, b3279, JW5710[1], JW5710

Product Desc.

putative transferase[2]; conserved protein[3]

Function unknown, low abundance protein[4]

Product Synonyms(s)

conserved protein[1], B3279[2][1], YrdA[2][1] , ECK3266, JW5710, b3279

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yrdA[2]

Regulation/Activity
Quick Links



        

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Notes

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The observed MW of YrdA is 19 kDa, consistent with the ALT_INIT. YrdA is related to gamma class carbonic anhydrases. YrdA is a member of the hexapeptide repeat acetyltransferase superfamily. yrdA is paralogous to paaY and caiE.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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