yliE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0823, b0833, JW0817''<ref name='LIB:Riley_2006'/>
''ECK0823, b0833, JW0817''<ref name='LIB:Riley_2006'/>, JW0817''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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conserved inner membrane protein<ref name='LIB:Riley_2006'/>, B0833<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YliE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''conserved inner membrane protein<ref name='LIB:Riley_2006'/>, B0833<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YliE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0823, JW0817, b0833''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yliE&loc=MG1655:872202..874550,W3110:873401..875749,DH10B:926130..928478,REL606:865783..867879 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=865783&end=867879&gene=yliE&aa=mlslyekikirliilfllaalsfiglffiinyqlvseravkradsrfeliqknvgyffkdiersaltlkdslyllknteeiqravilkmemmpfldsvglvlddnkyylfsrrandkivvyhqeqvngplvdesgrvifadfnpskrpwsvasddsnnswnpayncfdrpgkkcisftlhingkdhdllavdkihvdlnwrylneyldqisandevlflkqgheiiaknqlarekliiynsegnyniidsvdteyiektsavpnnalfeiyfyypggnllnasdklfylpfafiiivllvvylmttrvfrrqfsemtelvntlaflpdstdqiealkiregdakeiisiknsiaemkdaeiersnkllslisydqesgfiknmaiiesnnnqylavgiiklcgleaveavfgvdernkivrklcqriaekyaqccdivtfnadlylllcrenvqtftrkiamvndfdssfgyrnlrihksaiceplqgenawsyaeklklaissirdhmfsefifcddaklneieeniwiarnirhameigelflvyqpivdintrailgaealcrwvsaergiisplkfitiaedigfinelgyqiiktamgefrhfsqraslkddfllhinvspwqlnephfherfttimkenglkanslcveitetvierinehfylnieqlrkqgvrisiddfgtglsnlkrfyeinpdsikvdsqftgdifgtagkivriifdlarynripviaegvesedvareliklgcvqaqgylyqkpmpfsawdksgklvke Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yliE+AND+escherichia+coli Pubmed(yliE)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=yliE Textpresso(yliE)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yliE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6433]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003033&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yliE&loc=MG1655%3A872202..874550,W3110%3A873401..875749,DH10B%3A926130..928478,REL606%3A865783..867879,BW2952%3A775170..777518]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=775170&end=777518&gene=yliE&aa=mlslyekikirliilfllaalsfiglffiinyqlvseravkradsrfeliqknvgyffkdiersaltlkdslyllknteeiqravilkmemmpfldsvglvlddnkyylfsrrandkivvyhqeqvngplvdesgrvifadfnpskrpwsvasddsnnswnpayncfdrpgkkcisftlhingkdhdllavdkihvdlnwrylneyldqisandevlflkqgheiiaknqlarekliiynsegnyniidsvdteyiektsavpnnalfeiyfyypggnllnasdklfylpfafiiivllvvylmttrvfrrqfsemtelvntlaflpdstdqiealkiregdakeiisiknsiaemkdaeiersnkllslisydqesgfiknmaiiesnnnqylavgiiklcgleaveavfgvdernkivrklcqriaekyaqccdivtfnadlylllcrenvqtftrkiamvndfdssfgyrnlrihksaiceplqgenawsyaeklklaissirdhmfsefifcddaklneieeniwiarnirhameigelflvyqpivdintrailgaealcrwvsaergiisplkfitiaedigfinelgyqiiktamgefrhfsqraslkddfllhinvspwqlnephfherfttimkenglkanslcveitetvierinehfylnieqlrkqgvrisiddfgtglsnlkrfyeinpdsikvdsqftgdifgtagkivriifdlarynripviaegvesedvareliklgcvqaqgylyqkpmpfsawdksgklvke]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yliE+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yliE]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yliE

Gene Synonym(s)

ECK0823, b0833, JW0817[1], JW0817

Product Desc.

conserved inner membrane protein[2][3]

Putative cyclic-di-GMP phosphodiesterase, function unknown[4]

Product Synonyms(s)

conserved inner membrane protein[1], B0833[2][1], YliE[2][1] , ECK0823, JW0817, b0833

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yliE[2]

Regulation/Activity
Quick Links



        

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Notes

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YliE has a C-terminal cyclic-di-GMP phosphodiesterase EAL domain. YliEF may constitute a cyclic-di-GMP synthesis/degradation module. A yliE rssB9(hnr) double null mutant has significantly increased lycopene production in 1X M9; the effect may be salt-suppressible as it is not seen in 2X M9 (Alper, 2008).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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