hcaF:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2536, b2539, JW2523, hcaA2, digB, phdC2, hcaA, yfhV''<ref name='LIB:Riley_2006'/> | ''ECK2536, b2539, JW2523, hcaA2, digB, phdC2, hcaA, yfhV''<ref name='LIB:Riley_2006'/>, hcaB, yfhV'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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3-phenylpropionate dioxygenase, small (beta) subunit<ref name='LIB:Riley_2006'/>, B2539<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfhV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DigB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaA2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 3-phenylpropionate dioxygenase, small subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''3-phenylpropionate dioxygenase, small (beta) subunit<ref name='LIB:Riley_2006'/>, B2539<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfhV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DigB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaA2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 3-phenylpropionate dioxygenase, small subunit<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , digB, ECK2536, hcaA, hcaA2, hcaB, JW2523, phdC2, yfhV, b2539'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://ecoliwiki.net/tools/display_dna.php?gene=hcaF&loc=MG1655 | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=hcaF&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=M015]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004474&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=hcaF&loc=MG1655%3A2668412..2668930,W3110%3A2669046..2669564,REL606%3A2591089..2591607,DH10B%3A2760177..2760695,BW2952%3A2554217..2554735]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2554217&end=2554735&gene=hcaF&aa=msaqvslelhhrisqflfheasllddwkfrdwlaqldeeirytmrttvnaqtrdrrkgvqppttwifndtkdqlerriarletgmawaeeppsrtrhlisncqisetdipnvfavrvnyllyraqkerdetfyvgtrfdkvrrleddnwrllerdivldqavitshnlsvlf]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hcaF+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=hcaF]] | ||
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Latest revision as of 21:49, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
hcaF |
|---|---|
| Gene Synonym(s) |
ECK2536, b2539, JW2523, hcaA2, digB, phdC2, hcaA, yfhV[1], hcaB, yfhV |
| Product Desc. |
3-phenylpropionate dioxygenase, β subunit[2][3]; Component of 3-phenylpropionate dioxygenase system[2][3]; 3-phenylpropionate dioxygenase system[2][3] 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit; hca genes catabolize 3-phenylpropionate and cinnamic acid, feeding the products into the the mhp pathway[4] |
| Product Synonyms(s) |
3-phenylpropionate dioxygenase, small (beta) subunit[1], B2539[2][1], HcaA[2][1], YfhV[2][1], DigB[2][1], HcaF[2][1], HcaA2[2][1], 3-phenylpropionate dioxygenase, small subunit[2][1] , digB, ECK2536, hcaA, hcaA2, hcaB, JW2523, phdC2, yfhV, b2539 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Hydrocinnamic acid is a synonym for 3-phenylpropionic acid.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.