frdA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''frdA''  
''frdA''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4150, b4154, JW4115''<ref name='LIB:Riley_2006'/>
''ECK4150, b4154, JW4115''<ref name='LIB:Riley_2006'/>, JW4115''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit product<ref name='LIB:Riley_2006'/>, B4154 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FrdA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit<ref name='LIB:Riley_2006'/>, B4154<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FrdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4150, JW4115, b4154''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=frdA&loc=MG1655:4380341..4378533,W3110:4386998..4385190,REL606:4361029..4359221,DH10B:4480703..4478895 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4480703&end=4478895&gene=frdA&aa=mqtfqadlaivgaggaglraaiaaaqanpnakialiskvypmrshtvaaeggsaavaqdhdsfeyhfhdtvaggdwlceqdvvdyfvhhcptemtqlelwgcpwsrrpdgsvnvrrfggmkiertwfaadktgfhmlhtlfqtslqfpqiqrfdehfvldilvddghvrglvamnmmegtlvqiranavvmatggagrvyryntnggivtgdgmgmalshgvplrdmefvqyhptglpgsgilmtegcrgeggilvnkngyrylqdygmgpetplgepknkymelgprdkvsqafwhewrkgntistprgdvvyldlrhlgekklherlpficelakayvgvdpvkepipvrptahytmggietdqncetrikglfavgecssvglhganrlgsnslaelvvfgrlageqateraatagngneaaieaqaagveqrlkdlvnqdggenwakirdemglameegcgiyrtpelmqktidklaelqerfkrvritdtssvfntdllytielghglnvaecmahsamarkesrgahqrldegcterddvnflkhtlafrdadgttrleysdvkittlppakrvyggeadaadkaeaankkekang Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=frdA+AND+escherichia+coli Pubmed(frdA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=frdA Textpresso(frdA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=frdA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10330]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000324&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=frdA&loc=MG1655%3A4380341..4378533,W3110%3A4386998..4385190,REL606%3A4361029..4359221,DH10B%3A4480703..4478895,BW2952%3A4317268..4319076]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4317268&end=4319076&gene=frdA&aa=mqtfqadlaivgaggaglraaiaaaqanpnakialiskvypmrshtvaaeggsaavaqdhdsfeyhfhdtvaggdwlceqdvvdyfvhhcptemtqlelwgcpwsrrpdgsvnvrrfggmkiertwfaadktgfhmlhtlfqtslqfpqiqrfdehfvldilvddghvrglvamnmmegtlvqiranavvmatggagrvyryntnggivtgdgmgmalshgvplrdmefvqyhptglpgsgilmtegcrgeggilvnkngyrylqdygmgpetplgepknkymelgprdkvsqafwhewrkgntistprgdvvyldlrhlgekklherlpficelakayvgvdpvkepipvrptahytmggietdqncetrikglfavgecssvglhganrlgsnslaelvvfgrlageqateraatagngneaaieaqaagveqrlkdlvnqdggenwakirdemglameegcgiyrtpelmqktidklaelqerfkrvritdtssvfntdllytielghglnvaecmahsamarkesrgahqrldegcterddvnflkhtlafrdadgttrleysdvkittlppakrvyggeadaadkaeaankkekang]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=frdA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=frdA]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

frdA

Gene Synonym(s)

ECK4150, b4154, JW4115[1], JW4115

Product Desc.

fumarate reductase flavoprotein[2][3];

Component of fumarate reductase[2][3]

Fumarate reductase flavoprotein subunit[4]

Product Synonyms(s)

fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit[1], B4154[2][1], FrdA[2][1] , ECK4150, JW4115, b4154

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): frdABCD[2], OP00030, frd

Regulation/Activity
Quick Links



        

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Notes

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frdA transcription is repressed by nitrate via the NarXL system. Repression is both direct by repressing promoter activity and indirect by repressing dcuS promoter activity. HT_Cmplx15_Mem: FrdA+FrdB.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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